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Cluster: MGYG000001864_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001864_1 MGYG000001864_1_3 1496 3469 - 3.A.16.1.1
TC MGYG000001864_1 MGYG000001864_1_4 3780 4610 + 3.A.1.26.7
TC MGYG000001864_1 MGYG000001864_1_5 4586 5464 + 3.A.1.26.7
TC MGYG000001864_1 MGYG000001864_1_6 5461 6279 + 3.A.1.25.4
pfam MGYG000001864_1 MGYG000001864_1_7 6276 7010 + PseudoU_synth_1 | PseudoU_synth_1 | DUF2344
pfam MGYG000001864_1 MGYG000001864_1_8 7036 7803 + Flg_new
TC MGYG000001864_1 MGYG000001864_1_9 8229 9626 + 1.A.26.1.1
pfam MGYG000001864_1 MGYG000001864_1_10 9811 11298 + DUF1846 | DUF1846_C
TF MGYG000001864_1 MGYG000001864_1_11 11658 12485 - HTH_AraC | HTH_AraC
CAZyme MGYG000001864_1 MGYG000001864_1_12 12653 17728 + GH97
Gene ID: MGYG000001864_1_3
Type: TC
Location: 1496 - 3469 (-)
Gene ID: MGYG000001864_1_4
Type: TC
Location: 3780 - 4610 (+)
Gene ID: MGYG000001864_1_5
Type: TC
Location: 4586 - 5464 (+)
Gene ID: MGYG000001864_1_6
Type: TC
Location: 5461 - 6279 (+)
Gene ID: MGYG000001864_1_7
Type: pfam
Location: 6276 - 7010 (+)
Gene ID: MGYG000001864_1_8
Type: pfam
Location: 7036 - 7803 (+)
Gene ID: MGYG000001864_1_9
Type: TC
Location: 8229 - 9626 (+)
Gene ID: MGYG000001864_1_10
Type: pfam
Location: 9811 - 11298 (+)
Gene ID: MGYG000001864_1_11
Type: TF
Location: 11658 - 12485 (-)
Gene ID: MGYG000001864_1_12
Type: CAZyme
Location: 12653 - 17728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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