Cluster: MGYG000001840_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001840
- CGC Family ID: CGCFAM_07620
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001840_1 | MGYG000001840_1_8 | 3967 | 8538 | - | 3.A.7.17.1 |
| pfam | MGYG000001840_1 | MGYG000001840_1_9 | 8600 | 9499 | - | Glyco_tran_28_C | GtrA_DPMS_TM |
| pfam | MGYG000001840_1 | MGYG000001840_1_10 | 9499 | 9969 | - | Alg14 |
| CAZyme | MGYG000001840_1 | MGYG000001840_1_11 | 10039 | 11001 | - | GT2 |
| TC | MGYG000001840_1 | MGYG000001840_1_12 | 11005 | 11778 | - | 3.A.1.103.4 |
| CAZyme | MGYG000001840_1 | MGYG000001840_1_13 | 11775 | 14162 | - | GT2 | GT4 |
| TC | MGYG000001840_1 | MGYG000001840_1_14 | 14174 | 14926 | - | 3.A.1.103.4 |
| CAZyme | MGYG000001840_1 | MGYG000001840_1_15 | 15003 | 16091 | - | GT4 |
| CAZyme | MGYG000001840_1 | MGYG000001840_1_16 | 16088 | 16990 | - | GT2 |
| CAZyme | MGYG000001840_1 | MGYG000001840_1_17 | 16992 | 18083 | - | GT4 |
| pfam | MGYG000001840_1 | MGYG000001840_1_18 | 18080 | 19483 | - | Wzy_C | O-antigen_lig |
| CAZyme | MGYG000001840_1 | MGYG000001840_1_19 | 19487 | 20464 | - | GT2 |
| CAZyme | MGYG000001840_1 | MGYG000001840_1_20 | 20478 | 21422 | - | GT2 |
Gene ID: MGYG000001840_1_8
Type: TC
Location: 3967 - 8538 (-)
Type: TC
Location: 3967 - 8538 (-)
Gene ID: MGYG000001840_1_9
Type: pfam
Location: 8600 - 9499 (-)
Type: pfam
Location: 8600 - 9499 (-)
Gene ID: MGYG000001840_1_10
Type: pfam
Location: 9499 - 9969 (-)
Type: pfam
Location: 9499 - 9969 (-)
Gene ID: MGYG000001840_1_11
Type: CAZyme
Location: 10039 - 11001 (-)
Type: CAZyme
Location: 10039 - 11001 (-)
Gene ID: MGYG000001840_1_12
Type: TC
Location: 11005 - 11778 (-)
Type: TC
Location: 11005 - 11778 (-)
Gene ID: MGYG000001840_1_13
Type: CAZyme
Location: 11775 - 14162 (-)
Type: CAZyme
Location: 11775 - 14162 (-)
Gene ID: MGYG000001840_1_14
Type: TC
Location: 14174 - 14926 (-)
Type: TC
Location: 14174 - 14926 (-)
Gene ID: MGYG000001840_1_15
Type: CAZyme
Location: 15003 - 16091 (-)
Type: CAZyme
Location: 15003 - 16091 (-)
Gene ID: MGYG000001840_1_16
Type: CAZyme
Location: 16088 - 16990 (-)
Type: CAZyme
Location: 16088 - 16990 (-)
Gene ID: MGYG000001840_1_17
Type: CAZyme
Location: 16992 - 18083 (-)
Type: CAZyme
Location: 16992 - 18083 (-)
Gene ID: MGYG000001840_1_18
Type: pfam
Location: 18080 - 19483 (-)
Type: pfam
Location: 18080 - 19483 (-)
Gene ID: MGYG000001840_1_19
Type: CAZyme
Location: 19487 - 20464 (-)
Type: CAZyme
Location: 19487 - 20464 (-)
Gene ID: MGYG000001840_1_20
Type: CAZyme
Location: 20478 - 21422 (-)
Type: CAZyme
Location: 20478 - 21422 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UMGS2016
Species
UMGS2016 sp905203475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.