Cluster: MGYG000001833_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001833
- CGC Family ID: CGCFAM_02311
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001833_2 | MGYG000001833_2_11 | 12841 | 14172 | + | 2.A.66.1.13 |
| CAZyme | MGYG000001833_2 | MGYG000001833_2_12 | 14216 | 15598 | - | GT2 |
| CAZyme | MGYG000001833_2 | MGYG000001833_2_13 | 15626 | 16531 | - | GT2 |
| CAZyme | MGYG000001833_2 | MGYG000001833_2_14 | 16535 | 17392 | - | GT2 |
| pfam | MGYG000001833_2 | MGYG000001833_2_15 | 17631 | 18557 | + | DUF5050 |
| pfam | MGYG000001833_2 | MGYG000001833_2_16 | 18784 | 19122 | - | Thioredoxin_3 |
| TC | MGYG000001833_2 | MGYG000001833_2_17 | 19137 | 20150 | - | 2.A.119.1.3 |
Gene ID: MGYG000001833_2_11
Type: TC
Location: 12841 - 14172 (+)
Type: TC
Location: 12841 - 14172 (+)
Gene ID: MGYG000001833_2_12
Type: CAZyme
Location: 14216 - 15598 (-)
Type: CAZyme
Location: 14216 - 15598 (-)
Gene ID: MGYG000001833_2_13
Type: CAZyme
Location: 15626 - 16531 (-)
Type: CAZyme
Location: 15626 - 16531 (-)
Gene ID: MGYG000001833_2_14
Type: CAZyme
Location: 16535 - 17392 (-)
Type: CAZyme
Location: 16535 - 17392 (-)
Gene ID: MGYG000001833_2_15
Type: pfam
Location: 17631 - 18557 (+)
Type: pfam
Location: 17631 - 18557 (+)
Gene ID: MGYG000001833_2_16
Type: pfam
Location: 18784 - 19122 (-)
Type: pfam
Location: 18784 - 19122 (-)
Gene ID: MGYG000001833_2_17
Type: TC
Location: 19137 - 20150 (-)
Type: TC
Location: 19137 - 20150 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Species
Gallispira sp905201505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.