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Cluster: MGYG000001832_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001832_2 MGYG000001832_2_3 1554 2726 - GH3
NULL(UNKNOWN) MGYG000001832_2 MGYG000001832_2_4 2773 3168 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001832_2 MGYG000001832_2_5 3217 3894 + 2.A.53.3.8
pfam MGYG000001832_2 MGYG000001832_2_6 4495 5049 + DUF305
TC MGYG000001832_2 MGYG000001832_2_7 5498 6337 + 2.A.7.31.3
TC MGYG000001832_2 MGYG000001832_2_8 6793 7356 + 2.A.107.1.1
TC MGYG000001832_2 MGYG000001832_2_9 7463 8911 + 2.A.4.7.5
TC MGYG000001832_2 MGYG000001832_2_10 9259 10371 - 2.A.6.4.1
TC MGYG000001832_2 MGYG000001832_2_11 10432 12018 - 2.A.6.4.1
TC MGYG000001832_2 MGYG000001832_2_12 12219 12560 - 3.A.5.1.1
Gene ID: MGYG000001832_2_3
Type: CAZyme
Location: 1554 - 2726 (-)
Gene ID: MGYG000001832_2_4
Type:
Location: 2773 - 3168 (-)
Gene ID: MGYG000001832_2_5
Type: TC
Location: 3217 - 3894 (+)
Gene ID: MGYG000001832_2_6
Type: pfam
Location: 4495 - 5049 (+)
Gene ID: MGYG000001832_2_7
Type: TC
Location: 5498 - 6337 (+)
Gene ID: MGYG000001832_2_8
Type: TC
Location: 6793 - 7356 (+)
Gene ID: MGYG000001832_2_9
Type: TC
Location: 7463 - 8911 (+)
Gene ID: MGYG000001832_2_10
Type: TC
Location: 9259 - 10371 (-)
Gene ID: MGYG000001832_2_11
Type: TC
Location: 10432 - 12018 (-)
Gene ID: MGYG000001832_2_12
Type: TC
Location: 12219 - 12560 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001832_2_8 vegan > omnivore 1.00224 0.02024

🧭 Explore Read Mapping of CGC

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