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Cluster: MGYG000001815_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001815_29 MGYG000001815_29_11 8531 11281 + 3.A.9.1.2
STP MGYG000001815_29 MGYG000001815_29_12 11685 11969 + SBP_bac_3
STP MGYG000001815_29 MGYG000001815_29_13 12000 14288 + HATPase_c | HisKA | Response_reg | SBP_bac_3
TC MGYG000001815_29 MGYG000001815_29_14 14587 16089 + 2.A.25.1.3
pfam MGYG000001815_29 MGYG000001815_29_15 16376 17221 + Aminotran_4
pfam MGYG000001815_29 MGYG000001815_29_16 17233 18150 + GLUCM-like_C
CAZyme MGYG000001815_29 MGYG000001815_29_17 18270 19688 + AA4
Gene ID: MGYG000001815_29_11
Type: TC
Location: 8531 - 11281 (+)
Gene ID: MGYG000001815_29_12
Type: STP
Location: 11685 - 11969 (+)
Gene ID: MGYG000001815_29_13
Type: STP
Location: 12000 - 14288 (+)
Gene ID: MGYG000001815_29_14
Type: TC
Location: 14587 - 16089 (+)
Gene ID: MGYG000001815_29_15
Type: pfam
Location: 16376 - 17221 (+)
Gene ID: MGYG000001815_29_16
Type: pfam
Location: 17233 - 18150 (+)
Gene ID: MGYG000001815_29_17
Type: CAZyme
Location: 18270 - 19688 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001815_29_17 vegetarian > omnivore 1.28352 0.00141

🧭 Explore Read Mapping of CGC

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