Cluster: MGYG000001787_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_06252
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001787_3 | MGYG000001787_3_3 | 1788 | 2819 | + | 2.A.1.3.24 |
| NULL(UNKNOWN) | MGYG000001787_3 | MGYG000001787_3_4 | 2822 | 4438 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001787_3 | MGYG000001787_3_5 | 4532 | 5095 | - | Hexapep | Mac | Hexapep_2 |
| CAZyme | MGYG000001787_3 | MGYG000001787_3_6 | 5157 | 6785 | - | GH27 |
| TC | MGYG000001787_3 | MGYG000001787_3_7 | 6856 | 8154 | - | 9.A.40.2.1 |
| peptidase | MGYG000001787_3 | MGYG000001787_3_8 | 8377 | 10827 | - | S09.UPB |
| CAZyme | MGYG000001787_3 | MGYG000001787_3_9 | 11027 | 13285 | - | CBM32 | GH29 |
| NULL(UNKNOWN) | MGYG000001787_3 | MGYG000001787_3_10 | 13359 | 13523 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001787_3 | MGYG000001787_3_11 | 13812 | 16181 | + | 1.B.14.3.1 |
| pfam | MGYG000001787_3 | MGYG000001787_3_12 | 16301 | 17737 | + | DUF4374 |
| pfam | MGYG000001787_3 | MGYG000001787_3_13 | 17778 | 19055 | + | PepSY_TM |
| CAZyme | MGYG000001787_3 | MGYG000001787_3_14 | 19309 | 22191 | - | GH31_4 |
Gene ID: MGYG000001787_3_3
Type: TC
Location: 1788 - 2819 (+)
Type: TC
Location: 1788 - 2819 (+)
Gene ID: MGYG000001787_3_4
Type:
Location: 2822 - 4438 (+)
Type:
Location: 2822 - 4438 (+)
Gene ID: MGYG000001787_3_5
Type: pfam
Location: 4532 - 5095 (-)
Type: pfam
Location: 4532 - 5095 (-)
Gene ID: MGYG000001787_3_6
Type: CAZyme
Location: 5157 - 6785 (-)
Type: CAZyme
Location: 5157 - 6785 (-)
Gene ID: MGYG000001787_3_7
Type: TC
Location: 6856 - 8154 (-)
Type: TC
Location: 6856 - 8154 (-)
Gene ID: MGYG000001787_3_8
Type: peptidase
Location: 8377 - 10827 (-)
Type: peptidase
Location: 8377 - 10827 (-)
Gene ID: MGYG000001787_3_9
Type: CAZyme
Location: 11027 - 13285 (-)
Type: CAZyme
Location: 11027 - 13285 (-)
Gene ID: MGYG000001787_3_10
Type:
Location: 13359 - 13523 (-)
Type:
Location: 13359 - 13523 (-)
Gene ID: MGYG000001787_3_11
Type: TC
Location: 13812 - 16181 (+)
Type: TC
Location: 13812 - 16181 (+)
Gene ID: MGYG000001787_3_12
Type: pfam
Location: 16301 - 17737 (+)
Type: pfam
Location: 16301 - 17737 (+)
Gene ID: MGYG000001787_3_13
Type: pfam
Location: 17778 - 19055 (+)
Type: pfam
Location: 17778 - 19055 (+)
Gene ID: MGYG000001787_3_14
Type: CAZyme
Location: 19309 - 22191 (-)
Type: CAZyme
Location: 19309 - 22191 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.