Cluster: MGYG000001787_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_00759
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001787_2 | MGYG000001787_2_1 | 1 | 1668 | + | GH92 |
| TC | MGYG000001787_2 | MGYG000001787_2_2 | 1679 | 2839 | + | 2.A.1.7.16 |
| CAZyme | MGYG000001787_2 | MGYG000001787_2_3 | 2857 | 5742 | + | GH38 |
| pfam | MGYG000001787_2 | MGYG000001787_2_4 | 5796 | 6461 | - | Methyltransf_30 |
| TC | MGYG000001787_2 | MGYG000001787_2_5 | 6487 | 6948 | - | 9.B.27.3.3 |
Gene ID: MGYG000001787_2_1
Type: CAZyme
Location: 1 - 1668 (+)
Type: CAZyme
Location: 1 - 1668 (+)
Gene ID: MGYG000001787_2_2
Type: TC
Location: 1679 - 2839 (+)
Type: TC
Location: 1679 - 2839 (+)
Gene ID: MGYG000001787_2_3
Type: CAZyme
Location: 2857 - 5742 (+)
Type: CAZyme
Location: 2857 - 5742 (+)
Gene ID: MGYG000001787_2_4
Type: pfam
Location: 5796 - 6461 (-)
Type: pfam
Location: 5796 - 6461 (-)
Gene ID: MGYG000001787_2_5
Type: TC
Location: 6487 - 6948 (-)
Type: TC
Location: 6487 - 6948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.