Cluster: MGYG000001787_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_00229
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001787_16 | MGYG000001787_16_3 | 798 | 1748 | + | GT2 |
| pfam | MGYG000001787_16 | MGYG000001787_16_4 | 1754 | 2299 | + | DUF6452 |
| pfam | MGYG000001787_16 | MGYG000001787_16_5 | 2253 | 2963 | + | DUF6048 |
| TC | MGYG000001787_16 | MGYG000001787_16_6 | 2967 | 3542 | + | 2.A.107.1.2 |
| pfam | MGYG000001787_16 | MGYG000001787_16_7 | 3556 | 4569 | + | ApbE |
| pfam | MGYG000001787_16 | MGYG000001787_16_8 | 5055 | 5954 | + | Abi_2 |
| TC | MGYG000001787_16 | MGYG000001787_16_9 | 6127 | 7029 | - | 2.A.7.3.57 |
Gene ID: MGYG000001787_16_3
Type: CAZyme
Location: 798 - 1748 (+)
Type: CAZyme
Location: 798 - 1748 (+)
Gene ID: MGYG000001787_16_4
Type: pfam
Location: 1754 - 2299 (+)
Type: pfam
Location: 1754 - 2299 (+)
Gene ID: MGYG000001787_16_5
Type: pfam
Location: 2253 - 2963 (+)
Type: pfam
Location: 2253 - 2963 (+)
Gene ID: MGYG000001787_16_6
Type: TC
Location: 2967 - 3542 (+)
Type: TC
Location: 2967 - 3542 (+)
Gene ID: MGYG000001787_16_7
Type: pfam
Location: 3556 - 4569 (+)
Type: pfam
Location: 3556 - 4569 (+)
Gene ID: MGYG000001787_16_8
Type: pfam
Location: 5055 - 5954 (+)
Type: pfam
Location: 5055 - 5954 (+)
Gene ID: MGYG000001787_16_9
Type: TC
Location: 6127 - 7029 (-)
Type: TC
Location: 6127 - 7029 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.