Cluster: MGYG000001787_CGC2
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_00754
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001787_1 | MGYG000001787_1_41 | 43272 | 44735 | - | CE20 |
| CAZyme | MGYG000001787_1 | MGYG000001787_1_42 | 44699 | 45988 | - | CE7 |
| CAZyme | MGYG000001787_1 | MGYG000001787_1_43 | 46080 | 48284 | - | GH36 |
| CAZyme | MGYG000001787_1 | MGYG000001787_1_44 | 48517 | 49614 | + | CE2 |
| CAZyme | MGYG000001787_1 | MGYG000001787_1_45 | 49771 | 52203 | + | GH2 |
| TF | MGYG000001787_1 | MGYG000001787_1_46 | 52321 | 53199 | + | HTH_AraC |
| CAZyme | MGYG000001787_1 | MGYG000001787_1_47 | 53490 | 54809 | + | GH5_7 |
| NULL(UNKNOWN) | MGYG000001787_1 | MGYG000001787_1_48 | 54772 | 54885 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001787_1 | MGYG000001787_1_49 | 55024 | 58272 | + | 1.B.14.6.1 |
| TC | MGYG000001787_1 | MGYG000001787_1_50 | 58287 | 60050 | + | 8.A.46.1.3 |
Gene ID: MGYG000001787_1_41
Type: CAZyme
Location: 43272 - 44735 (-)
Type: CAZyme
Location: 43272 - 44735 (-)
Gene ID: MGYG000001787_1_42
Type: CAZyme
Location: 44699 - 45988 (-)
Type: CAZyme
Location: 44699 - 45988 (-)
Gene ID: MGYG000001787_1_43
Type: CAZyme
Location: 46080 - 48284 (-)
Type: CAZyme
Location: 46080 - 48284 (-)
Gene ID: MGYG000001787_1_44
Type: CAZyme
Location: 48517 - 49614 (+)
Type: CAZyme
Location: 48517 - 49614 (+)
Gene ID: MGYG000001787_1_45
Type: CAZyme
Location: 49771 - 52203 (+)
Type: CAZyme
Location: 49771 - 52203 (+)
Gene ID: MGYG000001787_1_46
Type: TF
Location: 52321 - 53199 (+)
Type: TF
Location: 52321 - 53199 (+)
Gene ID: MGYG000001787_1_47
Type: CAZyme
Location: 53490 - 54809 (+)
Type: CAZyme
Location: 53490 - 54809 (+)
Gene ID: MGYG000001787_1_48
Type:
Location: 54772 - 54885 (-)
Type:
Location: 54772 - 54885 (-)
Gene ID: MGYG000001787_1_49
Type: TC
Location: 55024 - 58272 (+)
Type: TC
Location: 55024 - 58272 (+)
Gene ID: MGYG000001787_1_50
Type: TC
Location: 58287 - 60050 (+)
Type: TC
Location: 58287 - 60050 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.