Cluster: MGYG000001787_CGC19
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 12
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_10831
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001787_14 | MGYG000001787_14_15 | 13742 | 14449 | - | 3.A.1.125.1 |
| pfam | MGYG000001787_14 | MGYG000001787_14_16 | 14456 | 15238 | - | ThiF |
| TC | MGYG000001787_14 | MGYG000001787_14_17 | 15217 | 17382 | - | 2.A.37.2.5 |
| pfam | MGYG000001787_14 | MGYG000001787_14_18 | 17530 | 18540 | + | Semialdhyde_dh | Semialdhyde_dhC |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_19 | 18752 | 20908 | - | GH133 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_20 | 21127 | 23421 | - | GH29 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_21 | 23434 | 25170 | - | CBM32 | GH43_28 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_22 | 25182 | 27407 | - | GH3 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_23 | 27455 | 29677 | - | GH182 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_24 | 29730 | 32288 | - | GH2 |
| NULL(UNKNOWN) | MGYG000001787_14 | MGYG000001787_14_25 | 32388 | 34652 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_26 | 34773 | 37097 | - | GH92 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_27 | 37274 | 39442 | - | GH92 |
| NULL(UNKNOWN) | MGYG000001787_14 | MGYG000001787_14_28 | 39604 | 39801 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_29 | 40071 | 42329 | - | GH92 |
| pfam | MGYG000001787_14 | MGYG000001787_14_30 | 42351 | 45329 | - | Laminin_G_3 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_31 | 45438 | 47456 | - | GH92 |
| pfam | MGYG000001787_14 | MGYG000001787_14_32 | 47477 | 48535 | - | Alk_phosphatase | Metalloenzyme |
| NULL(UNKNOWN) | MGYG000001787_14 | MGYG000001787_14_33 | 48696 | 48878 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_34 | 48896 | 50296 | - | GH43_2 |
| CAZyme | MGYG000001787_14 | MGYG000001787_14_35 | 50389 | 52665 | - | CBM6 | GH120 |
Gene ID: MGYG000001787_14_15
Type: TC
Location: 13742 - 14449 (-)
Type: TC
Location: 13742 - 14449 (-)
Gene ID: MGYG000001787_14_16
Type: pfam
Location: 14456 - 15238 (-)
Type: pfam
Location: 14456 - 15238 (-)
Gene ID: MGYG000001787_14_17
Type: TC
Location: 15217 - 17382 (-)
Type: TC
Location: 15217 - 17382 (-)
Gene ID: MGYG000001787_14_18
Type: pfam
Location: 17530 - 18540 (+)
Type: pfam
Location: 17530 - 18540 (+)
Gene ID: MGYG000001787_14_19
Type: CAZyme
Location: 18752 - 20908 (-)
Type: CAZyme
Location: 18752 - 20908 (-)
Gene ID: MGYG000001787_14_20
Type: CAZyme
Location: 21127 - 23421 (-)
Type: CAZyme
Location: 21127 - 23421 (-)
Gene ID: MGYG000001787_14_21
Type: CAZyme
Location: 23434 - 25170 (-)
Type: CAZyme
Location: 23434 - 25170 (-)
Gene ID: MGYG000001787_14_22
Type: CAZyme
Location: 25182 - 27407 (-)
Type: CAZyme
Location: 25182 - 27407 (-)
Gene ID: MGYG000001787_14_23
Type: CAZyme
Location: 27455 - 29677 (-)
Type: CAZyme
Location: 27455 - 29677 (-)
Gene ID: MGYG000001787_14_24
Type: CAZyme
Location: 29730 - 32288 (-)
Type: CAZyme
Location: 29730 - 32288 (-)
Gene ID: MGYG000001787_14_25
Type:
Location: 32388 - 34652 (-)
Type:
Location: 32388 - 34652 (-)
Gene ID: MGYG000001787_14_26
Type: CAZyme
Location: 34773 - 37097 (-)
Type: CAZyme
Location: 34773 - 37097 (-)
Gene ID: MGYG000001787_14_27
Type: CAZyme
Location: 37274 - 39442 (-)
Type: CAZyme
Location: 37274 - 39442 (-)
Gene ID: MGYG000001787_14_28
Type:
Location: 39604 - 39801 (+)
Type:
Location: 39604 - 39801 (+)
Gene ID: MGYG000001787_14_29
Type: CAZyme
Location: 40071 - 42329 (-)
Type: CAZyme
Location: 40071 - 42329 (-)
Gene ID: MGYG000001787_14_30
Type: pfam
Location: 42351 - 45329 (-)
Type: pfam
Location: 42351 - 45329 (-)
Gene ID: MGYG000001787_14_31
Type: CAZyme
Location: 45438 - 47456 (-)
Type: CAZyme
Location: 45438 - 47456 (-)
Gene ID: MGYG000001787_14_32
Type: pfam
Location: 47477 - 48535 (-)
Type: pfam
Location: 47477 - 48535 (-)
Gene ID: MGYG000001787_14_33
Type:
Location: 48696 - 48878 (-)
Type:
Location: 48696 - 48878 (-)
Gene ID: MGYG000001787_14_34
Type: CAZyme
Location: 48896 - 50296 (-)
Type: CAZyme
Location: 48896 - 50296 (-)
Gene ID: MGYG000001787_14_35
Type: CAZyme
Location: 50389 - 52665 (-)
Type: CAZyme
Location: 50389 - 52665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.