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Cluster: MGYG000001787_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001787_11 MGYG000001787_11_18 19555 20160 - 2.A.124.1.4
pfam MGYG000001787_11 MGYG000001787_11_19 20165 20479 - Lys_export
TF MGYG000001787_11 MGYG000001787_11_20 20913 21737 + HTH_AraC
TC MGYG000001787_11 MGYG000001787_11_21 21771 23636 - 3.A.16.1.3
CAZyme MGYG000001787_11 MGYG000001787_11_22 24287 26851 + GH2
CAZyme MGYG000001787_11 MGYG000001787_11_23 26947 29271 + GH20
CAZyme MGYG000001787_11 MGYG000001787_11_24 29306 31342 + GH20
CAZyme MGYG000001787_11 MGYG000001787_11_25 31478 33715 + GH92
TC MGYG000001787_11 MGYG000001787_11_26 33966 34712 + 9.B.158.1.1
Gene ID: MGYG000001787_11_18
Type: TC
Location: 19555 - 20160 (-)
Gene ID: MGYG000001787_11_19
Type: pfam
Location: 20165 - 20479 (-)
Gene ID: MGYG000001787_11_20
Type: TF
Location: 20913 - 21737 (+)
Gene ID: MGYG000001787_11_21
Type: TC
Location: 21771 - 23636 (-)
Gene ID: MGYG000001787_11_22
Type: CAZyme
Location: 24287 - 26851 (+)
Gene ID: MGYG000001787_11_23
Type: CAZyme
Location: 26947 - 29271 (+)
Gene ID: MGYG000001787_11_24
Type: CAZyme
Location: 29306 - 31342 (+)
Gene ID: MGYG000001787_11_25
Type: CAZyme
Location: 31478 - 33715 (+)
Gene ID: MGYG000001787_11_26
Type: TC
Location: 33966 - 34712 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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