Cluster: MGYG000001787_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_00081
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001787_10 | MGYG000001787_10_35 | 41982 | 42332 | + | 3.D.1.8.1 |
| TC | MGYG000001787_10 | MGYG000001787_10_36 | 42356 | 42922 | + | 3.D.1.3.1 |
| TC | MGYG000001787_10 | MGYG000001787_10_37 | 42925 | 44547 | + | 3.D.1.5.1 |
| TC | MGYG000001787_10 | MGYG000001787_10_38 | 44697 | 45785 | + | 3.D.1.5.1 |
| STP | MGYG000001787_10 | MGYG000001787_10_39 | 45796 | 46269 | + | Fer4 | Fer4 |
| TC | MGYG000001787_10 | MGYG000001787_10_40 | 46279 | 46803 | + | 3.D.9.1.1 |
| TC | MGYG000001787_10 | MGYG000001787_10_41 | 46918 | 47235 | + | 3.D.1.2.1 |
| TC | MGYG000001787_10 | MGYG000001787_10_42 | 47261 | 49150 | + | 3.D.9.1.1 |
| TC | MGYG000001787_10 | MGYG000001787_10_43 | 49177 | 50658 | + | 3.D.1.2.1 |
| TC | MGYG000001787_10 | MGYG000001787_10_44 | 50690 | 52075 | + | 3.D.9.1.1 |
| pfam | MGYG000001787_10 | MGYG000001787_10_45 | 52290 | 53258 | + | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | MGYG000001787_10 | MGYG000001787_10_46 | 53361 | 55562 | + | GH92 |
Gene ID: MGYG000001787_10_35
Type: TC
Location: 41982 - 42332 (+)
Type: TC
Location: 41982 - 42332 (+)
Gene ID: MGYG000001787_10_36
Type: TC
Location: 42356 - 42922 (+)
Type: TC
Location: 42356 - 42922 (+)
Gene ID: MGYG000001787_10_37
Type: TC
Location: 42925 - 44547 (+)
Type: TC
Location: 42925 - 44547 (+)
Gene ID: MGYG000001787_10_38
Type: TC
Location: 44697 - 45785 (+)
Type: TC
Location: 44697 - 45785 (+)
Gene ID: MGYG000001787_10_39
Type: STP
Location: 45796 - 46269 (+)
Type: STP
Location: 45796 - 46269 (+)
Gene ID: MGYG000001787_10_40
Type: TC
Location: 46279 - 46803 (+)
Type: TC
Location: 46279 - 46803 (+)
Gene ID: MGYG000001787_10_41
Type: TC
Location: 46918 - 47235 (+)
Type: TC
Location: 46918 - 47235 (+)
Gene ID: MGYG000001787_10_42
Type: TC
Location: 47261 - 49150 (+)
Type: TC
Location: 47261 - 49150 (+)
Gene ID: MGYG000001787_10_43
Type: TC
Location: 49177 - 50658 (+)
Type: TC
Location: 49177 - 50658 (+)
Gene ID: MGYG000001787_10_44
Type: TC
Location: 50690 - 52075 (+)
Type: TC
Location: 50690 - 52075 (+)
Gene ID: MGYG000001787_10_45
Type: pfam
Location: 52290 - 53258 (+)
Type: pfam
Location: 52290 - 53258 (+)
Gene ID: MGYG000001787_10_46
Type: CAZyme
Location: 53361 - 55562 (+)
Type: CAZyme
Location: 53361 - 55562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.