Cluster: MGYG000001787_CGC15
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_07542
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001787_8 | MGYG000001787_8_26 | 35405 | 37687 | - | GH92 |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_27 | 37700 | 40015 | - | GH92 |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_28 | 40039 | 42252 | - | GH92 |
| pfam | MGYG000001787_8 | MGYG000001787_8_29 | 42504 | 44270 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001787_8 | MGYG000001787_8_30 | 44285 | 47524 | - | 1.B.14.6.1 |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_31 | 47820 | 50174 | - | GH3 |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_32 | 50186 | 51580 | - | GH29 |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_33 | 51599 | 52978 | - | GH29 |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_34 | 53001 | 54932 | - | GH33 |
| pfam | MGYG000001787_8 | MGYG000001787_8_35 | 55239 | 56957 | - | SusD-like | SusD-like_2 |
| TC | MGYG000001787_8 | MGYG000001787_8_36 | 56993 | 60445 | - | 1.B.14.6.2 |
| TC | MGYG000001787_8 | MGYG000001787_8_37 | 60980 | 64123 | + | 1.B.14.6.13 |
| TC | MGYG000001787_8 | MGYG000001787_8_38 | 64145 | 66091 | + | 8.A.46.2.2 |
Gene ID: MGYG000001787_8_26
Type: CAZyme
Location: 35405 - 37687 (-)
Type: CAZyme
Location: 35405 - 37687 (-)
Gene ID: MGYG000001787_8_27
Type: CAZyme
Location: 37700 - 40015 (-)
Type: CAZyme
Location: 37700 - 40015 (-)
Gene ID: MGYG000001787_8_28
Type: CAZyme
Location: 40039 - 42252 (-)
Type: CAZyme
Location: 40039 - 42252 (-)
Gene ID: MGYG000001787_8_29
Type: pfam
Location: 42504 - 44270 (-)
Type: pfam
Location: 42504 - 44270 (-)
Gene ID: MGYG000001787_8_30
Type: TC
Location: 44285 - 47524 (-)
Type: TC
Location: 44285 - 47524 (-)
Gene ID: MGYG000001787_8_31
Type: CAZyme
Location: 47820 - 50174 (-)
Type: CAZyme
Location: 47820 - 50174 (-)
Gene ID: MGYG000001787_8_32
Type: CAZyme
Location: 50186 - 51580 (-)
Type: CAZyme
Location: 50186 - 51580 (-)
Gene ID: MGYG000001787_8_33
Type: CAZyme
Location: 51599 - 52978 (-)
Type: CAZyme
Location: 51599 - 52978 (-)
Gene ID: MGYG000001787_8_34
Type: CAZyme
Location: 53001 - 54932 (-)
Type: CAZyme
Location: 53001 - 54932 (-)
Gene ID: MGYG000001787_8_35
Type: pfam
Location: 55239 - 56957 (-)
Type: pfam
Location: 55239 - 56957 (-)
Gene ID: MGYG000001787_8_36
Type: TC
Location: 56993 - 60445 (-)
Type: TC
Location: 56993 - 60445 (-)
Gene ID: MGYG000001787_8_37
Type: TC
Location: 60980 - 64123 (+)
Type: TC
Location: 60980 - 64123 (+)
Gene ID: MGYG000001787_8_38
Type: TC
Location: 64145 - 66091 (+)
Type: TC
Location: 64145 - 66091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.