Cluster: MGYG000001787_CGC14
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001787
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001787_8 | MGYG000001787_8_8 | 10289 | 13045 | - | 1.B.42.1.8 |
| STP | MGYG000001787_8 | MGYG000001787_8_9 | 13133 | 13669 | - | HD |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_10 | 13901 | 15088 | + | GH171 |
| TC | MGYG000001787_8 | MGYG000001787_8_11 | 15204 | 16919 | - | 8.A.46.1.1 |
| TC | MGYG000001787_8 | MGYG000001787_8_12 | 16969 | 20040 | - | 1.B.14.6.1 |
| pfam | MGYG000001787_8 | MGYG000001787_8_13 | 20049 | 20957 | - | AP_endonuc_2 |
| sulfatase | MGYG000001787_8 | MGYG000001787_8_14 | 21046 | 21936 | - | S1_20 |
| CAZyme | MGYG000001787_8 | MGYG000001787_8_15 | 21989 | 23464 | - | GH109 |
| pfam | MGYG000001787_8 | MGYG000001787_8_16 | 23499 | 24581 | - | GFO_IDH_MocA | GFO_IDH_MocA_C3 |
| TC | MGYG000001787_8 | MGYG000001787_8_17 | 24612 | 25421 | - | 2.A.64.1.3 |
| pfam | MGYG000001787_8 | MGYG000001787_8_18 | 25427 | 25651 | - | TatA_B_E |
| pfam | MGYG000001787_8 | MGYG000001787_8_19 | 26064 | 27728 | + | DUF6377 |
| TC | MGYG000001787_8 | MGYG000001787_8_20 | 27783 | 29108 | - | 3.A.5.1.1 |
| TC | MGYG000001787_8 | MGYG000001787_8_21 | 29195 | 30598 | - | 2.A.66.1.28 |
Gene ID: MGYG000001787_8_8
Type: TC
Location: 10289 - 13045 (-)
Type: TC
Location: 10289 - 13045 (-)
Gene ID: MGYG000001787_8_9
Type: STP
Location: 13133 - 13669 (-)
Type: STP
Location: 13133 - 13669 (-)
Gene ID: MGYG000001787_8_10
Type: CAZyme
Location: 13901 - 15088 (+)
Type: CAZyme
Location: 13901 - 15088 (+)
Gene ID: MGYG000001787_8_11
Type: TC
Location: 15204 - 16919 (-)
Type: TC
Location: 15204 - 16919 (-)
Gene ID: MGYG000001787_8_12
Type: TC
Location: 16969 - 20040 (-)
Type: TC
Location: 16969 - 20040 (-)
Gene ID: MGYG000001787_8_13
Type: pfam
Location: 20049 - 20957 (-)
Type: pfam
Location: 20049 - 20957 (-)
Gene ID: MGYG000001787_8_14
Type: sulfatase
Location: 21046 - 21936 (-)
Type: sulfatase
Location: 21046 - 21936 (-)
Gene ID: MGYG000001787_8_15
Type: CAZyme
Location: 21989 - 23464 (-)
Type: CAZyme
Location: 21989 - 23464 (-)
Gene ID: MGYG000001787_8_16
Type: pfam
Location: 23499 - 24581 (-)
Type: pfam
Location: 23499 - 24581 (-)
Gene ID: MGYG000001787_8_17
Type: TC
Location: 24612 - 25421 (-)
Type: TC
Location: 24612 - 25421 (-)
Gene ID: MGYG000001787_8_18
Type: pfam
Location: 25427 - 25651 (-)
Type: pfam
Location: 25427 - 25651 (-)
Gene ID: MGYG000001787_8_19
Type: pfam
Location: 26064 - 27728 (+)
Type: pfam
Location: 26064 - 27728 (+)
Gene ID: MGYG000001787_8_20
Type: TC
Location: 27783 - 29108 (-)
Type: TC
Location: 27783 - 29108 (-)
Gene ID: MGYG000001787_8_21
Type: TC
Location: 29195 - 30598 (-)
Type: TC
Location: 29195 - 30598 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.