Cluster: MGYG000001787_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001787
- CGC Family ID: CGCFAM_01220
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001787_6 | MGYG000001787_6_23 | 23612 | 24328 | + | 9.B.186.1.3 |
| CAZyme | MGYG000001787_6 | MGYG000001787_6_24 | 24429 | 25115 | + | GT51 |
| pfam | MGYG000001787_6 | MGYG000001787_6_25 | 25105 | 25941 | - | AmiA-like |
| TC | MGYG000001787_6 | MGYG000001787_6_26 | 25931 | 26572 | - | 1.A.62.2.1 |
| TC | MGYG000001787_6 | MGYG000001787_6_27 | 26611 | 28038 | - | 9.B.168.1.2 |
| peptidase | MGYG000001787_6 | MGYG000001787_6_28 | 28231 | 29829 | + | C26.964 |
| TC | MGYG000001787_6 | MGYG000001787_6_29 | 29860 | 31713 | + | 2.A.9.3.1 |
| CAZyme | MGYG000001787_6 | MGYG000001787_6_30 | 31885 | 33852 | + | GH20 |
| peptidase | MGYG000001787_6 | MGYG000001787_6_31 | 34225 | 36327 | + | S09.075 |
| pfam | MGYG000001787_6 | MGYG000001787_6_32 | 36408 | 37064 | - | CBM9_2 |
| CAZyme | MGYG000001787_6 | MGYG000001787_6_33 | 37241 | 39265 | + | GH65 |
| TC | MGYG000001787_6 | MGYG000001787_6_34 | 39291 | 41939 | - | 3.A.3.4.1 |
Gene ID: MGYG000001787_6_23
Type: TC
Location: 23612 - 24328 (+)
Type: TC
Location: 23612 - 24328 (+)
Gene ID: MGYG000001787_6_24
Type: CAZyme
Location: 24429 - 25115 (+)
Type: CAZyme
Location: 24429 - 25115 (+)
Gene ID: MGYG000001787_6_25
Type: pfam
Location: 25105 - 25941 (-)
Type: pfam
Location: 25105 - 25941 (-)
Gene ID: MGYG000001787_6_26
Type: TC
Location: 25931 - 26572 (-)
Type: TC
Location: 25931 - 26572 (-)
Gene ID: MGYG000001787_6_27
Type: TC
Location: 26611 - 28038 (-)
Type: TC
Location: 26611 - 28038 (-)
Gene ID: MGYG000001787_6_28
Type: peptidase
Location: 28231 - 29829 (+)
Type: peptidase
Location: 28231 - 29829 (+)
Gene ID: MGYG000001787_6_29
Type: TC
Location: 29860 - 31713 (+)
Type: TC
Location: 29860 - 31713 (+)
Gene ID: MGYG000001787_6_30
Type: CAZyme
Location: 31885 - 33852 (+)
Type: CAZyme
Location: 31885 - 33852 (+)
Gene ID: MGYG000001787_6_31
Type: peptidase
Location: 34225 - 36327 (+)
Type: peptidase
Location: 34225 - 36327 (+)
Gene ID: MGYG000001787_6_32
Type: pfam
Location: 36408 - 37064 (-)
Type: pfam
Location: 36408 - 37064 (-)
Gene ID: MGYG000001787_6_33
Type: CAZyme
Location: 37241 - 39265 (+)
Type: CAZyme
Location: 37241 - 39265 (+)
Gene ID: MGYG000001787_6_34
Type: TC
Location: 39291 - 41939 (-)
Type: TC
Location: 39291 - 41939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.