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Cluster: MGYG000001781_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001781_5 MGYG000001781_5_24 23680 24702 - 2.A.98.1.4
TF MGYG000001781_5 MGYG000001781_5_25 24834 25730 + HTH_1
TF MGYG000001781_5 MGYG000001781_5_26 25919 27199 + HTH_AraC
TC MGYG000001781_5 MGYG000001781_5_27 27196 28917 + 9.B.33.1.1
STP MGYG000001781_5 MGYG000001781_5_28 28904 29866 + Peripla_BP_1
pfam MGYG000001781_5 MGYG000001781_5_29 30057 31397 + Peripla_BP_4 | Peripla_BP_7
TC MGYG000001781_5 MGYG000001781_5_30 31586 33094 + 3.A.1.2.3
TC MGYG000001781_5 MGYG000001781_5_31 33109 34764 + 3.A.1.2.3
CAZyme MGYG000001781_5 MGYG000001781_5_32 35031 37580 + GH106
CAZyme MGYG000001781_5 MGYG000001781_5_33 37699 40413 - CBM67 | GH78
CAZyme MGYG000001781_5 MGYG000001781_5_34 40444 42207 - GH2
TF MGYG000001781_5 MGYG000001781_5_35 42364 43131 - HTH_AraC | HTH_AraC
CAZyme MGYG000001781_5 MGYG000001781_5_36 43253 45094 + GH146
TF MGYG000001781_5 MGYG000001781_5_37 45122 45979 - HTH_1
TC MGYG000001781_5 MGYG000001781_5_38 46087 46650 + 2.A.51.1.6
TC MGYG000001781_5 MGYG000001781_5_39 46647 47204 + 2.A.51.1.6
Gene ID: MGYG000001781_5_24
Type: TC
Location: 23680 - 24702 (-)
Gene ID: MGYG000001781_5_25
Type: TF
Location: 24834 - 25730 (+)
Gene ID: MGYG000001781_5_26
Type: TF
Location: 25919 - 27199 (+)
Gene ID: MGYG000001781_5_27
Type: TC
Location: 27196 - 28917 (+)
Gene ID: MGYG000001781_5_28
Type: STP
Location: 28904 - 29866 (+)
Gene ID: MGYG000001781_5_29
Type: pfam
Location: 30057 - 31397 (+)
Gene ID: MGYG000001781_5_30
Type: TC
Location: 31586 - 33094 (+)
Gene ID: MGYG000001781_5_31
Type: TC
Location: 33109 - 34764 (+)
Gene ID: MGYG000001781_5_32
Type: CAZyme
Location: 35031 - 37580 (+)
Gene ID: MGYG000001781_5_33
Type: CAZyme
Location: 37699 - 40413 (-)
Gene ID: MGYG000001781_5_34
Type: CAZyme
Location: 40444 - 42207 (-)
Gene ID: MGYG000001781_5_35
Type: TF
Location: 42364 - 43131 (-)
Gene ID: MGYG000001781_5_36
Type: CAZyme
Location: 43253 - 45094 (+)
Gene ID: MGYG000001781_5_37
Type: TF
Location: 45122 - 45979 (-)
Gene ID: MGYG000001781_5_38
Type: TC
Location: 46087 - 46650 (+)
Gene ID: MGYG000001781_5_39
Type: TC
Location: 46647 - 47204 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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