Cluster: MGYG000001777_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001777
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001777_3 | MGYG000001777_3_41 | 39212 | 39916 | - | 3.A.1.125.3 |
| STP | MGYG000001777_3 | MGYG000001777_3_42 | 39997 | 40989 | - | HATPase_c | HisKA |
| TF | MGYG000001777_3 | MGYG000001777_3_43 | 40979 | 41659 | - | Trans_reg_C |
| CAZyme | MGYG000001777_3 | MGYG000001777_3_44 | 41673 | 43862 | - | GH5_2 |
| pfam | MGYG000001777_3 | MGYG000001777_3_45 | 43879 | 44421 | - | DUF3877 |
| TC | MGYG000001777_3 | MGYG000001777_3_46 | 44436 | 45635 | - | 9.B.174.1.1 |
| STP | MGYG000001777_3 | MGYG000001777_3_47 | 45717 | 47006 | - | Peptidase_M23 |
| pfam | MGYG000001777_3 | MGYG000001777_3_48 | 47023 | 47934 | - | FtsX | FtsX_ECD |
| TC | MGYG000001777_3 | MGYG000001777_3_49 | 47921 | 48631 | - | 3.A.1.140.1 |
| pfam | MGYG000001777_3 | MGYG000001777_3_50 | 48676 | 49764 | - | HTH_30 | GGDEF_2 |
| TC | MGYG000001777_3 | MGYG000001777_3_51 | 49902 | 51014 | - | 3.A.1.1.26 |
Gene ID: MGYG000001777_3_41
Type: TC
Location: 39212 - 39916 (-)
Type: TC
Location: 39212 - 39916 (-)
Gene ID: MGYG000001777_3_42
Type: STP
Location: 39997 - 40989 (-)
Type: STP
Location: 39997 - 40989 (-)
Gene ID: MGYG000001777_3_43
Type: TF
Location: 40979 - 41659 (-)
Type: TF
Location: 40979 - 41659 (-)
Gene ID: MGYG000001777_3_44
Type: CAZyme
Location: 41673 - 43862 (-)
Type: CAZyme
Location: 41673 - 43862 (-)
Gene ID: MGYG000001777_3_45
Type: pfam
Location: 43879 - 44421 (-)
Type: pfam
Location: 43879 - 44421 (-)
Gene ID: MGYG000001777_3_46
Type: TC
Location: 44436 - 45635 (-)
Type: TC
Location: 44436 - 45635 (-)
Gene ID: MGYG000001777_3_47
Type: STP
Location: 45717 - 47006 (-)
Type: STP
Location: 45717 - 47006 (-)
Gene ID: MGYG000001777_3_48
Type: pfam
Location: 47023 - 47934 (-)
Type: pfam
Location: 47023 - 47934 (-)
Gene ID: MGYG000001777_3_49
Type: TC
Location: 47921 - 48631 (-)
Type: TC
Location: 47921 - 48631 (-)
Gene ID: MGYG000001777_3_50
Type: pfam
Location: 48676 - 49764 (-)
Type: pfam
Location: 48676 - 49764 (-)
Gene ID: MGYG000001777_3_51
Type: TC
Location: 49902 - 51014 (-)
Type: TC
Location: 49902 - 51014 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000434115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001777_3_41 | vegetarian > vegan | 1.61439 | 0.00467 |
| MGYG000001777_3_43 | vegetarian > omnivore | 1.72730 | 0.03451 |
| MGYG000001777_3_43 | vegetarian > vegan | 2.30662 | 0.00467 |
| MGYG000001777_3_44 | vegetarian > vegan | 1.29634 | 0.00467 |
| MGYG000001777_3_46 | vegetarian > vegan | 1.38839 | 0.00467 |
| MGYG000001777_3_49 | vegetarian > vegan | 1.25577 | 0.00467 |