Cluster: MGYG000001777_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001777
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001777_43 | MGYG000001777_43_7 | 5177 | 6613 | + | GT5 |
| pfam | MGYG000001777_43 | MGYG000001777_43_8 | 6689 | 6988 | - | Trns_repr_metal |
| STP | MGYG000001777_43 | MGYG000001777_43_9 | 7222 | 7476 | + | HMA |
| TC | MGYG000001777_43 | MGYG000001777_43_10 | 7489 | 9747 | + | 3.A.3.5.15 |
| pfam | MGYG000001777_43 | MGYG000001777_43_11 | 9968 | 12238 | + | Meth_synt_2 | Meth_synt_1 |
| TF | MGYG000001777_43 | MGYG000001777_43_12 | 12228 | 13130 | - | HTH_1 |
| TC | MGYG000001777_43 | MGYG000001777_43_13 | 13127 | 13798 | - | 9.B.143.2.3 |
| TC | MGYG000001777_43 | MGYG000001777_43_14 | 13994 | 14785 | + | 2.A.5.5.5 |
Gene ID: MGYG000001777_43_7
Type: CAZyme
Location: 5177 - 6613 (+)
Type: CAZyme
Location: 5177 - 6613 (+)
Gene ID: MGYG000001777_43_8
Type: pfam
Location: 6689 - 6988 (-)
Type: pfam
Location: 6689 - 6988 (-)
Gene ID: MGYG000001777_43_9
Type: STP
Location: 7222 - 7476 (+)
Type: STP
Location: 7222 - 7476 (+)
Gene ID: MGYG000001777_43_10
Type: TC
Location: 7489 - 9747 (+)
Type: TC
Location: 7489 - 9747 (+)
Gene ID: MGYG000001777_43_11
Type: pfam
Location: 9968 - 12238 (+)
Type: pfam
Location: 9968 - 12238 (+)
Gene ID: MGYG000001777_43_12
Type: TF
Location: 12228 - 13130 (-)
Type: TF
Location: 12228 - 13130 (-)
Gene ID: MGYG000001777_43_13
Type: TC
Location: 13127 - 13798 (-)
Type: TC
Location: 13127 - 13798 (-)
Gene ID: MGYG000001777_43_14
Type: TC
Location: 13994 - 14785 (+)
Type: TC
Location: 13994 - 14785 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000434115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001777_43_8 | vegetarian > omnivore | 1.25479 | 0.03451 |
| MGYG000001777_43_8 | vegetarian > vegan | 1.53299 | 0.00467 |
| MGYG000001777_43_9 | vegetarian > omnivore | 1.34752 | 0.03451 |
| MGYG000001777_43_9 | vegetarian > vegan | 3.10129 | 0.00467 |
| MGYG000001777_43_12 | vegetarian > vegan | 1.05314 | 0.00467 |
| MGYG000001777_43_13 | vegetarian > vegan | 2.65439 | 0.00467 |
| MGYG000001777_43_14 | vegetarian > vegan | 2.19827 | 0.00467 |