Cluster: MGYG000001777_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001777
- CGC Family ID: CGCFAM_10829
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001777_39 | MGYG000001777_39_5 | 2526 | 3713 | + | GH10 |
| TC | MGYG000001777_39 | MGYG000001777_39_6 | 3831 | 5156 | + | 3.D.10.1.4 |
| pfam | MGYG000001777_39 | MGYG000001777_39_7 | 5153 | 6007 | + | QRPTase_C | QRPTase_N |
| pfam | MGYG000001777_39 | MGYG000001777_39_8 | 6366 | 8315 | - | DUF2207 | DUF2207_C |
| TC | MGYG000001777_39 | MGYG000001777_39_9 | 8760 | 10091 | + | 1.B.52.2.1 |
Gene ID: MGYG000001777_39_5
Type: CAZyme
Location: 2526 - 3713 (+)
Type: CAZyme
Location: 2526 - 3713 (+)
Gene ID: MGYG000001777_39_6
Type: TC
Location: 3831 - 5156 (+)
Type: TC
Location: 3831 - 5156 (+)
Gene ID: MGYG000001777_39_7
Type: pfam
Location: 5153 - 6007 (+)
Type: pfam
Location: 5153 - 6007 (+)
Gene ID: MGYG000001777_39_8
Type: pfam
Location: 6366 - 8315 (-)
Type: pfam
Location: 6366 - 8315 (-)
Gene ID: MGYG000001777_39_9
Type: TC
Location: 8760 - 10091 (+)
Type: TC
Location: 8760 - 10091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000434115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001777_39_6 | vegetarian > omnivore | 1.12909 | 0.03451 |
| MGYG000001777_39_9 | vegetarian > vegan | 1.93616 | 0.00305 |