Cluster: MGYG000001777_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001777
- CGC Family ID: CGCFAM_00731
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001777_38 | MGYG000001777_38_4 | 4258 | 6444 | + | GT2 |
| CAZyme | MGYG000001777_38 | MGYG000001777_38_5 | 6470 | 8845 | + | GT2 |
| pfam | MGYG000001777_38 | MGYG000001777_38_6 | 8847 | 10031 | + | Glyphos_transf |
| TC | MGYG000001777_38 | MGYG000001777_38_7 | 10039 | 12609 | - | 3.A.3.2.21 |
Gene ID: MGYG000001777_38_4
Type: CAZyme
Location: 4258 - 6444 (+)
Type: CAZyme
Location: 4258 - 6444 (+)
Gene ID: MGYG000001777_38_5
Type: CAZyme
Location: 6470 - 8845 (+)
Type: CAZyme
Location: 6470 - 8845 (+)
Gene ID: MGYG000001777_38_6
Type: pfam
Location: 8847 - 10031 (+)
Type: pfam
Location: 8847 - 10031 (+)
Gene ID: MGYG000001777_38_7
Type: TC
Location: 10039 - 12609 (-)
Type: TC
Location: 10039 - 12609 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000434115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001777_38_5 | vegetarian > vegan | 1.82288 | 0.00467 |
| MGYG000001777_38_6 | vegetarian > vegan | 1.74911 | 0.00467 |
| MGYG000001777_38_7 | vegetarian > vegan | 1.51324 | 0.00467 |