Cluster: MGYG000001777_CGC17
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001777
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001777_23 | MGYG000001777_23_4 | 2974 | 3741 | + | 3.A.1.3.24 |
| TC | MGYG000001777_23 | MGYG000001777_23_5 | 3959 | 4801 | + | 3.A.1.3.15 |
| TC | MGYG000001777_23 | MGYG000001777_23_6 | 4897 | 5547 | + | 3.A.1.3.14 |
| pfam | MGYG000001777_23 | MGYG000001777_23_7 | 5564 | 7063 | + | Lyase_aromatic |
| TC | MGYG000001777_23 | MGYG000001777_23_8 | 7526 | 9250 | + | 2.A.58.2.2 |
| TC | MGYG000001777_23 | MGYG000001777_23_9 | 9247 | 9876 | + | 1.A.35.3.2 |
| TC | MGYG000001777_23 | MGYG000001777_23_10 | 9973 | 11778 | + | 1.B.52.2.2 |
| peptidase | MGYG000001777_23 | MGYG000001777_23_11 | 11831 | 13480 | + | S08.UPA |
| peptidase | MGYG000001777_23 | MGYG000001777_23_12 | 14103 | 15005 | + | S09.UPC |
| TC | MGYG000001777_23 | MGYG000001777_23_13 | 15051 | 17144 | + | 1.B.52.2.1 |
| STP | MGYG000001777_23 | MGYG000001777_23_14 | 17174 | 18358 | + | Aminotran_1_2 |
| STP | MGYG000001777_23 | MGYG000001777_23_15 | 18371 | 19438 | + | Aminotran_1_2 |
| CAZyme | MGYG000001777_23 | MGYG000001777_23_16 | 19501 | 20148 | + | GH25 |
Gene ID: MGYG000001777_23_4
Type: TC
Location: 2974 - 3741 (+)
Type: TC
Location: 2974 - 3741 (+)
Gene ID: MGYG000001777_23_5
Type: TC
Location: 3959 - 4801 (+)
Type: TC
Location: 3959 - 4801 (+)
Gene ID: MGYG000001777_23_6
Type: TC
Location: 4897 - 5547 (+)
Type: TC
Location: 4897 - 5547 (+)
Gene ID: MGYG000001777_23_7
Type: pfam
Location: 5564 - 7063 (+)
Type: pfam
Location: 5564 - 7063 (+)
Gene ID: MGYG000001777_23_8
Type: TC
Location: 7526 - 9250 (+)
Type: TC
Location: 7526 - 9250 (+)
Gene ID: MGYG000001777_23_9
Type: TC
Location: 9247 - 9876 (+)
Type: TC
Location: 9247 - 9876 (+)
Gene ID: MGYG000001777_23_10
Type: TC
Location: 9973 - 11778 (+)
Type: TC
Location: 9973 - 11778 (+)
Gene ID: MGYG000001777_23_11
Type: peptidase
Location: 11831 - 13480 (+)
Type: peptidase
Location: 11831 - 13480 (+)
Gene ID: MGYG000001777_23_12
Type: peptidase
Location: 14103 - 15005 (+)
Type: peptidase
Location: 14103 - 15005 (+)
Gene ID: MGYG000001777_23_13
Type: TC
Location: 15051 - 17144 (+)
Type: TC
Location: 15051 - 17144 (+)
Gene ID: MGYG000001777_23_14
Type: STP
Location: 17174 - 18358 (+)
Type: STP
Location: 17174 - 18358 (+)
Gene ID: MGYG000001777_23_15
Type: STP
Location: 18371 - 19438 (+)
Type: STP
Location: 18371 - 19438 (+)
Gene ID: MGYG000001777_23_16
Type: CAZyme
Location: 19501 - 20148 (+)
Type: CAZyme
Location: 19501 - 20148 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000434115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001777_23_9 | vegetarian > vegan | 1.15294 | 0.00467 |
| MGYG000001777_23_11 | vegetarian > vegan | 2.27678 | 0.00467 |
| MGYG000001777_23_12 | vegetarian > vegan | 1.54173 | 0.00467 |
| MGYG000001777_23_13 | vegetarian > vegan | 1.00781 | 0.00467 |
| MGYG000001777_23_15 | vegetarian > vegan | 1.35446 | 0.00467 |
| MGYG000001777_23_16 | vegetarian > vegan | 1.91714 | 0.00467 |