Cluster: MGYG000001777_CGC10
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001777
- CGC Family ID: CGCFAM_05879
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001777_7 | MGYG000001777_7_41 | 36262 | 36942 | + | 3.A.1.122.14 |
| TC | MGYG000001777_7 | MGYG000001777_7_42 | 36926 | 37936 | + | 3.A.1.122.14 |
| NULL(UNKNOWN) | MGYG000001777_7 | MGYG000001777_7_43 | 37902 | 38000 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001777_7 | MGYG000001777_7_44 | 37997 | 38857 | + | CE4 |
| pfam | MGYG000001777_7 | MGYG000001777_7_45 | 38962 | 40368 | + | UxaC |
| CAZyme | MGYG000001777_7 | MGYG000001777_7_46 | 40396 | 43230 | + | GH115 |
| CAZyme | MGYG000001777_7 | MGYG000001777_7_47 | 43258 | 44595 | + | GH10 |
| TC | MGYG000001777_7 | MGYG000001777_7_48 | 44617 | 45687 | + | 3.A.1.11.8 |
| TC | MGYG000001777_7 | MGYG000001777_7_49 | 45680 | 46507 | + | 3.A.1.11.8 |
| TC | MGYG000001777_7 | MGYG000001777_7_50 | 46501 | 47286 | + | 3.A.1.11.7 |
| TC | MGYG000001777_7 | MGYG000001777_7_51 | 47287 | 48369 | + | 3.A.1.11.7 |
Gene ID: MGYG000001777_7_41
Type: TC
Location: 36262 - 36942 (+)
Type: TC
Location: 36262 - 36942 (+)
Gene ID: MGYG000001777_7_42
Type: TC
Location: 36926 - 37936 (+)
Type: TC
Location: 36926 - 37936 (+)
Gene ID: MGYG000001777_7_43
Type:
Location: 37902 - 38000 (+)
Type:
Location: 37902 - 38000 (+)
Gene ID: MGYG000001777_7_44
Type: CAZyme
Location: 37997 - 38857 (+)
Type: CAZyme
Location: 37997 - 38857 (+)
Gene ID: MGYG000001777_7_45
Type: pfam
Location: 38962 - 40368 (+)
Type: pfam
Location: 38962 - 40368 (+)
Gene ID: MGYG000001777_7_46
Type: CAZyme
Location: 40396 - 43230 (+)
Type: CAZyme
Location: 40396 - 43230 (+)
Gene ID: MGYG000001777_7_47
Type: CAZyme
Location: 43258 - 44595 (+)
Type: CAZyme
Location: 43258 - 44595 (+)
Gene ID: MGYG000001777_7_48
Type: TC
Location: 44617 - 45687 (+)
Type: TC
Location: 44617 - 45687 (+)
Gene ID: MGYG000001777_7_49
Type: TC
Location: 45680 - 46507 (+)
Type: TC
Location: 45680 - 46507 (+)
Gene ID: MGYG000001777_7_50
Type: TC
Location: 46501 - 47286 (+)
Type: TC
Location: 46501 - 47286 (+)
Gene ID: MGYG000001777_7_51
Type: TC
Location: 47287 - 48369 (+)
Type: TC
Location: 47287 - 48369 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000434115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001777_7_41 | vegetarian > vegan | 1.22417 | 0.00467 |
| MGYG000001777_7_43 | vegetarian > vegan | 2.45070 | 0.00467 |
| MGYG000001777_7_44 | vegetarian > vegan | 2.41639 | 0.00467 |
| MGYG000001777_7_45 | vegetarian > omnivore | 1.38548 | 0.03451 |
| MGYG000001777_7_45 | vegetarian > vegan | 1.30649 | 0.00467 |
| MGYG000001777_7_47 | vegetarian > vegan | 1.27267 | 0.00467 |
| MGYG000001777_7_49 | vegetarian > vegan | 1.70193 | 0.00467 |
| MGYG000001777_7_50 | vegetarian > vegan | 2.73908 | 0.00467 |
| MGYG000001777_7_51 | vegetarian > vegan | 1.77938 | 0.00467 |