Cluster: MGYG000001777_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001777
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001777_1 | MGYG000001777_1_34 | 38257 | 39174 | - | GT2 |
| CAZyme | MGYG000001777_1 | MGYG000001777_1_35 | 39177 | 40124 | - | GT2 |
| STP | MGYG000001777_1 | MGYG000001777_1_36 | 40344 | 42764 | - | B12-binding | B12-binding_2 |
| pfam | MGYG000001777_1 | MGYG000001777_1_37 | 42797 | 44545 | - | tRNA-synt_2b | HGTP_anticodon | tRNA_edit |
| TC | MGYG000001777_1 | MGYG000001777_1_38 | 44556 | 45935 | - | 2.A.66.1.32 |
Gene ID: MGYG000001777_1_34
Type: CAZyme
Location: 38257 - 39174 (-)
Type: CAZyme
Location: 38257 - 39174 (-)
Gene ID: MGYG000001777_1_35
Type: CAZyme
Location: 39177 - 40124 (-)
Type: CAZyme
Location: 39177 - 40124 (-)
Gene ID: MGYG000001777_1_36
Type: STP
Location: 40344 - 42764 (-)
Type: STP
Location: 40344 - 42764 (-)
Gene ID: MGYG000001777_1_37
Type: pfam
Location: 42797 - 44545 (-)
Type: pfam
Location: 42797 - 44545 (-)
Gene ID: MGYG000001777_1_38
Type: TC
Location: 44556 - 45935 (-)
Type: TC
Location: 44556 - 45935 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000434115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001777_1_34 | vegetarian > omnivore | 2.76932 | 0.03451 |
| MGYG000001777_1_34 | vegetarian > vegan | 1.81117 | 0.00467 |
| MGYG000001777_1_38 | vegetarian > omnivore | 1.33801 | 0.03451 |
| MGYG000001777_1_38 | vegetarian > vegan | 1.87974 | 0.00467 |