Cluster: MGYG000001776_CGC2
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001776
- CGC Family ID: CGCFAM_02729
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001776_4 | MGYG000001776_4_48 | 50988 | 53291 | + | GT4 |
| TC | MGYG000001776_4 | MGYG000001776_4_49 | 53394 | 54479 | + | 9.B.97.1.10 |
| pfam | MGYG000001776_4 | MGYG000001776_4_50 | 54772 | 57255 | + | YfhO | YfhO |
| CAZyme | MGYG000001776_4 | MGYG000001776_4_51 | 57530 | 58204 | + | CE3 |
| CAZyme | MGYG000001776_4 | MGYG000001776_4_52 | 58323 | 59240 | + | GT2 |
| TC | MGYG000001776_4 | MGYG000001776_4_53 | 59247 | 60770 | + | 3.A.7.19.1 |
| CAZyme | MGYG000001776_4 | MGYG000001776_4_54 | 60911 | 61861 | + | GT2 |
| CAZyme | MGYG000001776_4 | MGYG000001776_4_55 | 61854 | 62798 | + | GT2 |
| pfam | MGYG000001776_4 | MGYG000001776_4_56 | 62881 | 64128 | + | DUF6056 |
| pfam | MGYG000001776_4 | MGYG000001776_4_57 | 64263 | 65351 | + | Acyl_transf_3 |
| TC | MGYG000001776_4 | MGYG000001776_4_58 | 65438 | 66181 | + | 3.A.1.103.4 |
| TC | MGYG000001776_4 | MGYG000001776_4_59 | 66178 | 66960 | + | 3.A.1.103.4 |
| TC | MGYG000001776_4 | MGYG000001776_4_60 | 67038 | 67964 | + | 3.A.12.1.3 |
| STP | MGYG000001776_4 | MGYG000001776_4_61 | 68058 | 70511 | + | Fer4 |
| CAZyme | MGYG000001776_4 | MGYG000001776_4_62 | 70513 | 72828 | + | GT2 | GT4 |
| CAZyme | MGYG000001776_4 | MGYG000001776_4_63 | 72852 | 74816 | + | GH25 |
Gene ID: MGYG000001776_4_48
Type: CAZyme
Location: 50988 - 53291 (+)
Type: CAZyme
Location: 50988 - 53291 (+)
Gene ID: MGYG000001776_4_49
Type: TC
Location: 53394 - 54479 (+)
Type: TC
Location: 53394 - 54479 (+)
Gene ID: MGYG000001776_4_50
Type: pfam
Location: 54772 - 57255 (+)
Type: pfam
Location: 54772 - 57255 (+)
Gene ID: MGYG000001776_4_51
Type: CAZyme
Location: 57530 - 58204 (+)
Type: CAZyme
Location: 57530 - 58204 (+)
Gene ID: MGYG000001776_4_52
Type: CAZyme
Location: 58323 - 59240 (+)
Type: CAZyme
Location: 58323 - 59240 (+)
Gene ID: MGYG000001776_4_53
Type: TC
Location: 59247 - 60770 (+)
Type: TC
Location: 59247 - 60770 (+)
Gene ID: MGYG000001776_4_54
Type: CAZyme
Location: 60911 - 61861 (+)
Type: CAZyme
Location: 60911 - 61861 (+)
Gene ID: MGYG000001776_4_55
Type: CAZyme
Location: 61854 - 62798 (+)
Type: CAZyme
Location: 61854 - 62798 (+)
Gene ID: MGYG000001776_4_56
Type: pfam
Location: 62881 - 64128 (+)
Type: pfam
Location: 62881 - 64128 (+)
Gene ID: MGYG000001776_4_57
Type: pfam
Location: 64263 - 65351 (+)
Type: pfam
Location: 64263 - 65351 (+)
Gene ID: MGYG000001776_4_58
Type: TC
Location: 65438 - 66181 (+)
Type: TC
Location: 65438 - 66181 (+)
Gene ID: MGYG000001776_4_59
Type: TC
Location: 66178 - 66960 (+)
Type: TC
Location: 66178 - 66960 (+)
Gene ID: MGYG000001776_4_60
Type: TC
Location: 67038 - 67964 (+)
Type: TC
Location: 67038 - 67964 (+)
Gene ID: MGYG000001776_4_61
Type: STP
Location: 68058 - 70511 (+)
Type: STP
Location: 68058 - 70511 (+)
Gene ID: MGYG000001776_4_62
Type: CAZyme
Location: 70513 - 72828 (+)
Type: CAZyme
Location: 70513 - 72828 (+)
Gene ID: MGYG000001776_4_63
Type: CAZyme
Location: 72852 - 74816 (+)
Type: CAZyme
Location: 72852 - 74816 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
UBA3789
Species
UBA3789 sp900543055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.