Cluster: MGYG000001718_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001718
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001718_1 | MGYG000001718_1_23 | 22226 | 23245 | + | GH109 |
| pfam | MGYG000001718_1 | MGYG000001718_1_24 | 23397 | 24263 | + | AP_endonuc_2 |
| TC | MGYG000001718_1 | MGYG000001718_1_25 | 24411 | 25271 | + | 3.A.1.3.15 |
| TC | MGYG000001718_1 | MGYG000001718_1_26 | 25390 | 26751 | + | 3.A.1.3.16 |
| TC | MGYG000001718_1 | MGYG000001718_1_27 | 26764 | 27516 | + | 3.A.1.3.20 |
Gene ID: MGYG000001718_1_23
Type: CAZyme
Location: 22226 - 23245 (+)
Type: CAZyme
Location: 22226 - 23245 (+)
Gene ID: MGYG000001718_1_24
Type: pfam
Location: 23397 - 24263 (+)
Type: pfam
Location: 23397 - 24263 (+)
Gene ID: MGYG000001718_1_25
Type: TC
Location: 24411 - 25271 (+)
Type: TC
Location: 24411 - 25271 (+)
Gene ID: MGYG000001718_1_26
Type: TC
Location: 25390 - 26751 (+)
Type: TC
Location: 25390 - 26751 (+)
Gene ID: MGYG000001718_1_27
Type: TC
Location: 26764 - 27516 (+)
Type: TC
Location: 26764 - 27516 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900752545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.