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Cluster: MGYG000001715_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001715_13 MGYG000001715_13_12 11443 11886 + 4.A.6.1.16
pfam MGYG000001715_13 MGYG000001715_13_13 11886 12167 + YajC
TC MGYG000001715_13 MGYG000001715_13_14 12204 12686 + 4.A.6.1.4
TC MGYG000001715_13 MGYG000001715_13_15 12777 13577 + 4.A.6.1.4
TC MGYG000001715_13 MGYG000001715_13_16 13567 14649 + 4.A.6.1.4
TF MGYG000001715_13 MGYG000001715_13_17 14835 15566 + GntR
STP MGYG000001715_13 MGYG000001715_13_18 15681 16847 + SIS | SIS
CAZyme MGYG000001715_13 MGYG000001715_13_19 16965 17456 + CE9
Gene ID: MGYG000001715_13_12
Type: TC
Location: 11443 - 11886 (+)
Gene ID: MGYG000001715_13_13
Type: pfam
Location: 11886 - 12167 (+)
Gene ID: MGYG000001715_13_14
Type: TC
Location: 12204 - 12686 (+)
Gene ID: MGYG000001715_13_15
Type: TC
Location: 12777 - 13577 (+)
Gene ID: MGYG000001715_13_16
Type: TC
Location: 13567 - 14649 (+)
Gene ID: MGYG000001715_13_17
Type: TF
Location: 14835 - 15566 (+)
Gene ID: MGYG000001715_13_18
Type: STP
Location: 15681 - 16847 (+)
Gene ID: MGYG000001715_13_19
Type: CAZyme
Location: 16965 - 17456 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001715_13_13 vegan > omnivore 1.02168 0.01057

🧭 Explore Read Mapping of CGC

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