Cluster: MGYG000001687_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001687
- CGC Family ID: CGCFAM_00008
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001687_16 | MGYG000001687_16_31 | 28165 | 29142 | + | GT2 |
| CAZyme | MGYG000001687_16 | MGYG000001687_16_32 | 29160 | 31580 | - | GT2 |
| TC | MGYG000001687_16 | MGYG000001687_16_33 | 31581 | 32321 | - | 3.A.1.103.6 |
| TC | MGYG000001687_16 | MGYG000001687_16_34 | 32344 | 33108 | - | 3.A.1.103.6 |
| pfam | MGYG000001687_16 | MGYG000001687_16_35 | 33237 | 38465 | - | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 |
| STP | MGYG000001687_16 | MGYG000001687_16_36 | 38655 | 39596 | - | Rhodanese | Rhodanese |
| CAZyme | MGYG000001687_16 | MGYG000001687_16_37 | 39603 | 40937 | - | GT2 |
Gene ID: MGYG000001687_16_31
Type: CAZyme
Location: 28165 - 29142 (+)
Type: CAZyme
Location: 28165 - 29142 (+)
Gene ID: MGYG000001687_16_32
Type: CAZyme
Location: 29160 - 31580 (-)
Type: CAZyme
Location: 29160 - 31580 (-)
Gene ID: MGYG000001687_16_33
Type: TC
Location: 31581 - 32321 (-)
Type: TC
Location: 31581 - 32321 (-)
Gene ID: MGYG000001687_16_34
Type: TC
Location: 32344 - 33108 (-)
Type: TC
Location: 32344 - 33108 (-)
Gene ID: MGYG000001687_16_35
Type: pfam
Location: 33237 - 38465 (-)
Type: pfam
Location: 33237 - 38465 (-)
Gene ID: MGYG000001687_16_36
Type: STP
Location: 38655 - 39596 (-)
Type: STP
Location: 38655 - 39596 (-)
Gene ID: MGYG000001687_16_37
Type: CAZyme
Location: 39603 - 40937 (-)
Type: CAZyme
Location: 39603 - 40937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_D
Species
Dorea_D sp000433535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.