Cluster: MGYG000001687_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001687
- CGC Family ID: CGCFAM_02156
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001687_11 | MGYG000001687_11_9 | 9677 | 10720 | - | 3.A.1.2.14 |
| TC | MGYG000001687_11 | MGYG000001687_11_10 | 10722 | 11786 | - | 3.A.1.2.14 |
| TC | MGYG000001687_11 | MGYG000001687_11_11 | 11789 | 13303 | - | 3.A.1.2.23 |
| TC | MGYG000001687_11 | MGYG000001687_11_12 | 13420 | 14412 | - | 3.A.1.2.1 |
| TC | MGYG000001687_11 | MGYG000001687_11_13 | 14562 | 16046 | - | 8.A.59.2.1 |
| TF | MGYG000001687_11 | MGYG000001687_11_14 | 16058 | 17677 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000001687_11 | MGYG000001687_11_15 | 17695 | 18756 | - | 3.A.1.2.14 |
| CAZyme | MGYG000001687_11 | MGYG000001687_11_16 | 18953 | 22045 | - | GH43_22 |
| CAZyme | MGYG000001687_11 | MGYG000001687_11_17 | 22225 | 26520 | - | GH43_22 | GH43_34 |
| CAZyme | MGYG000001687_11 | MGYG000001687_11_18 | 26711 | 30997 | - | GH146 |
| pfam | MGYG000001687_11 | MGYG000001687_11_19 | 31141 | 34020 | - | Big_2 | Laminin_G_3 | Laminin_G_3 | aBig_2 |
| CAZyme | MGYG000001687_11 | MGYG000001687_11_20 | 34050 | 35960 | - | GH43_29 |
| CAZyme | MGYG000001687_11 | MGYG000001687_11_21 | 35964 | 41852 | - | GH43_22 | GH43_27 |
Gene ID: MGYG000001687_11_9
Type: TC
Location: 9677 - 10720 (-)
Type: TC
Location: 9677 - 10720 (-)
Gene ID: MGYG000001687_11_10
Type: TC
Location: 10722 - 11786 (-)
Type: TC
Location: 10722 - 11786 (-)
Gene ID: MGYG000001687_11_11
Type: TC
Location: 11789 - 13303 (-)
Type: TC
Location: 11789 - 13303 (-)
Gene ID: MGYG000001687_11_12
Type: TC
Location: 13420 - 14412 (-)
Type: TC
Location: 13420 - 14412 (-)
Gene ID: MGYG000001687_11_13
Type: TC
Location: 14562 - 16046 (-)
Type: TC
Location: 14562 - 16046 (-)
Gene ID: MGYG000001687_11_14
Type: TF
Location: 16058 - 17677 (-)
Type: TF
Location: 16058 - 17677 (-)
Gene ID: MGYG000001687_11_15
Type: TC
Location: 17695 - 18756 (-)
Type: TC
Location: 17695 - 18756 (-)
Gene ID: MGYG000001687_11_16
Type: CAZyme
Location: 18953 - 22045 (-)
Type: CAZyme
Location: 18953 - 22045 (-)
Gene ID: MGYG000001687_11_17
Type: CAZyme
Location: 22225 - 26520 (-)
Type: CAZyme
Location: 22225 - 26520 (-)
Gene ID: MGYG000001687_11_18
Type: CAZyme
Location: 26711 - 30997 (-)
Type: CAZyme
Location: 26711 - 30997 (-)
Gene ID: MGYG000001687_11_19
Type: pfam
Location: 31141 - 34020 (-)
Type: pfam
Location: 31141 - 34020 (-)
Gene ID: MGYG000001687_11_20
Type: CAZyme
Location: 34050 - 35960 (-)
Type: CAZyme
Location: 34050 - 35960 (-)
Gene ID: MGYG000001687_11_21
Type: CAZyme
Location: 35964 - 41852 (-)
Type: CAZyme
Location: 35964 - 41852 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_D
Species
Dorea_D sp000433535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.