dbCAN Logo

Cluster: MGYG000001685_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001685_10 MGYG000001685_10_18 21750 23132 + 2.A.6.4.2
TC MGYG000001685_10 MGYG000001685_10_19 23132 24088 + 2.A.6.4.2
pfam MGYG000001685_10 MGYG000001685_10_20 24236 24895 + DNA_alkylation
TC MGYG000001685_10 MGYG000001685_10_21 24915 25739 + 3.A.1.15.8
TC MGYG000001685_10 MGYG000001685_10_22 25739 26548 + 3.A.1.15.10
pfam MGYG000001685_10 MGYG000001685_10_23 26715 27794 + Acyl_transf_3
CAZyme MGYG000001685_10 MGYG000001685_10_24 28195 31275 + GH13_14
STP MGYG000001685_10 MGYG000001685_10_25 31843 33309 + Y_Y_Y | Y_Y_Y
CAZyme MGYG000001685_10 MGYG000001685_10_26 33355 35742 + GH13_42
CAZyme MGYG000001685_10 MGYG000001685_10_27 35830 38094 + GH13_42
pfam MGYG000001685_10 MGYG000001685_10_28 38268 38747 + tRNA_edit
TF MGYG000001685_10 MGYG000001685_10_29 39166 39696 + 0040517
CAZyme MGYG000001685_10 MGYG000001685_10_30 39913 42333 + CBM48 | GH13_9
Gene ID: MGYG000001685_10_18
Type: TC
Location: 21750 - 23132 (+)
Gene ID: MGYG000001685_10_19
Type: TC
Location: 23132 - 24088 (+)
Gene ID: MGYG000001685_10_20
Type: pfam
Location: 24236 - 24895 (+)
Gene ID: MGYG000001685_10_21
Type: TC
Location: 24915 - 25739 (+)
Gene ID: MGYG000001685_10_22
Type: TC
Location: 25739 - 26548 (+)
Gene ID: MGYG000001685_10_23
Type: pfam
Location: 26715 - 27794 (+)
Gene ID: MGYG000001685_10_24
Type: CAZyme
Location: 28195 - 31275 (+)
Gene ID: MGYG000001685_10_25
Type: STP
Location: 31843 - 33309 (+)
Gene ID: MGYG000001685_10_26
Type: CAZyme
Location: 33355 - 35742 (+)
Gene ID: MGYG000001685_10_27
Type: CAZyme
Location: 35830 - 38094 (+)
Gene ID: MGYG000001685_10_28
Type: pfam
Location: 38268 - 38747 (+)
Gene ID: MGYG000001685_10_29
Type: TF
Location: 39166 - 39696 (+)
Gene ID: MGYG000001685_10_30
Type: CAZyme
Location: 39913 - 42333 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List