Cluster: MGYG000001681_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001681
- CGC Family ID: CGCFAM_00003
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001681_36 | MGYG000001681_36_11 | 10465 | 11154 | - | 3.A.2.1.5 |
| NULL(UNKNOWN) | MGYG000001681_36 | MGYG000001681_36_12 | 11434 | 11799 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001681_36 | MGYG000001681_36_13 | 11822 | 12757 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | MGYG000001681_36 | MGYG000001681_36_14 | 12770 | 13897 | - | GT4 |
| CAZyme | MGYG000001681_36 | MGYG000001681_36_15 | 13897 | 15042 | - | GT4 |
Gene ID: MGYG000001681_36_11
Type: TC
Location: 10465 - 11154 (-)
Type: TC
Location: 10465 - 11154 (-)
Gene ID: MGYG000001681_36_12
Type:
Location: 11434 - 11799 (-)
Type:
Location: 11434 - 11799 (-)
Gene ID: MGYG000001681_36_13
Type: pfam
Location: 11822 - 12757 (-)
Type: pfam
Location: 11822 - 12757 (-)
Gene ID: MGYG000001681_36_14
Type: CAZyme
Location: 12770 - 13897 (-)
Type: CAZyme
Location: 12770 - 13897 (-)
Gene ID: MGYG000001681_36_15
Type: CAZyme
Location: 13897 - 15042 (-)
Type: CAZyme
Location: 13897 - 15042 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900761275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.