Cluster: MGYG000001681_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001681
- CGC Family ID: CGCFAM_00281
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001681_2 | MGYG000001681_2_13 | 17147 | 18538 | - | 2.A.50.2.1 |
| pfam | MGYG000001681_2 | MGYG000001681_2_14 | 18785 | 20539 | - | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_6 |
| TC | MGYG000001681_2 | MGYG000001681_2_15 | 20557 | 21498 | - | 9.B.102.7.10 |
| CAZyme | MGYG000001681_2 | MGYG000001681_2_16 | 21488 | 22639 | - | GT4 |
| CAZyme | MGYG000001681_2 | MGYG000001681_2_17 | 22626 | 23588 | - | GT2 |
| NULL(UNKNOWN) | MGYG000001681_2 | MGYG000001681_2_18 | 23594 | 25750 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001681_2 | MGYG000001681_2_19 | 25747 | 26925 | - | GT4 |
| CAZyme | MGYG000001681_2 | MGYG000001681_2_20 | 26922 | 28133 | - | GT4 |
| CAZyme | MGYG000001681_2 | MGYG000001681_2_21 | 28165 | 29235 | - | GT4 |
| NULL(UNKNOWN) | MGYG000001681_2 | MGYG000001681_2_22 | 29232 | 29741 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001681_2 | MGYG000001681_2_23 | 29761 | 30861 | - | MetW | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 |
| TC | MGYG000001681_2 | MGYG000001681_2_24 | 30966 | 32237 | - | 3.A.1.103.4 |
| TC | MGYG000001681_2 | MGYG000001681_2_25 | 32237 | 33013 | - | 3.A.1.103.4 |
Gene ID: MGYG000001681_2_13
Type: TC
Location: 17147 - 18538 (-)
Type: TC
Location: 17147 - 18538 (-)
Gene ID: MGYG000001681_2_14
Type: pfam
Location: 18785 - 20539 (-)
Type: pfam
Location: 18785 - 20539 (-)
Gene ID: MGYG000001681_2_15
Type: TC
Location: 20557 - 21498 (-)
Type: TC
Location: 20557 - 21498 (-)
Gene ID: MGYG000001681_2_16
Type: CAZyme
Location: 21488 - 22639 (-)
Type: CAZyme
Location: 21488 - 22639 (-)
Gene ID: MGYG000001681_2_17
Type: CAZyme
Location: 22626 - 23588 (-)
Type: CAZyme
Location: 22626 - 23588 (-)
Gene ID: MGYG000001681_2_18
Type:
Location: 23594 - 25750 (-)
Type:
Location: 23594 - 25750 (-)
Gene ID: MGYG000001681_2_19
Type: CAZyme
Location: 25747 - 26925 (-)
Type: CAZyme
Location: 25747 - 26925 (-)
Gene ID: MGYG000001681_2_20
Type: CAZyme
Location: 26922 - 28133 (-)
Type: CAZyme
Location: 26922 - 28133 (-)
Gene ID: MGYG000001681_2_21
Type: CAZyme
Location: 28165 - 29235 (-)
Type: CAZyme
Location: 28165 - 29235 (-)
Gene ID: MGYG000001681_2_22
Type:
Location: 29232 - 29741 (-)
Type:
Location: 29232 - 29741 (-)
Gene ID: MGYG000001681_2_23
Type: pfam
Location: 29761 - 30861 (-)
Type: pfam
Location: 29761 - 30861 (-)
Gene ID: MGYG000001681_2_24
Type: TC
Location: 30966 - 32237 (-)
Type: TC
Location: 30966 - 32237 (-)
Gene ID: MGYG000001681_2_25
Type: TC
Location: 32237 - 33013 (-)
Type: TC
Location: 32237 - 33013 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900761275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.