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Cluster: MGYG000001669_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001669_5 MGYG000001669_5_20 26194 28704 - GH39
TC MGYG000001669_5 MGYG000001669_5_21 28887 30467 + 3.A.1.2.20
TC MGYG000001669_5 MGYG000001669_5_22 30476 31468 + 3.A.1.2.25
NULL(UNKNOWN) MGYG000001669_5 MGYG000001669_5_23 31501 32655 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000001669_5 MGYG000001669_5_24 32704 33714 + BPD_transp_2
CAZyme MGYG000001669_5 MGYG000001669_5_25 33717 35411 + GH3
Gene ID: MGYG000001669_5_20
Type: CAZyme
Location: 26194 - 28704 (-)
Gene ID: MGYG000001669_5_21
Type: TC
Location: 28887 - 30467 (+)
Gene ID: MGYG000001669_5_22
Type: TC
Location: 30476 - 31468 (+)
Gene ID: MGYG000001669_5_23
Type:
Location: 31501 - 32655 (+)
Gene ID: MGYG000001669_5_24
Type: pfam
Location: 32704 - 33714 (+)
Gene ID: MGYG000001669_5_25
Type: CAZyme
Location: 33717 - 35411 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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