Cluster: MGYG000001666_CGC3
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate: beta-mannan/xylan/beta-glucan
- Genome ID: MGYG000001666
- CGC Family ID: CGCFAM_00044
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001666_4 | MGYG000001666_4_1 | 57 | 2141 | - | GH10 |
| pfam | MGYG000001666_4 | MGYG000001666_4_2 | 2182 | 3258 | - | BT_3987-like_N | DUF5627 |
| pfam | MGYG000001666_4 | MGYG000001666_4_3 | 3290 | 5044 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001666_4 | MGYG000001666_4_4 | 5063 | 7885 | - | 1.B.14.6.1 |
| pfam | MGYG000001666_4 | MGYG000001666_4_5 | 7912 | 9828 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001666_4 | MGYG000001666_4_6 | 9840 | 12974 | - | 1.B.14.6.1 |
| CAZyme | MGYG000001666_4 | MGYG000001666_4_7 | 13182 | 14900 | - | CBM91 | GH43_12 |
| CAZyme | MGYG000001666_4 | MGYG000001666_4_8 | 15355 | 16992 | - | CBM91 | GH43_10 |
| TF | MGYG000001666_4 | MGYG000001666_4_9 | 17267 | 21247 | + | HTH_AraC | HTH_AraC |
| TF | MGYG000001666_4 | MGYG000001666_4_10 | 21226 | 25290 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001666_4 | MGYG000001666_4_11 | 25559 | 27280 | + | GH35 |
| CAZyme | MGYG000001666_4 | MGYG000001666_4_12 | 27287 | 28954 | + | CE20 | CE20 |
| TC | MGYG000001666_4 | MGYG000001666_4_13 | 28971 | 30401 | + | 2.A.2.3.2 |
| CAZyme | MGYG000001666_4 | MGYG000001666_4_14 | 30414 | 31541 | + | GH10 |
| CAZyme | MGYG000001666_4 | MGYG000001666_4_15 | 31538 | 32512 | + | GH43_1 |
| CAZyme | MGYG000001666_4 | MGYG000001666_4_16 | 32505 | 34358 | + | GH67 |
Gene ID: MGYG000001666_4_1
Type: CAZyme
Location: 57 - 2141 (-)
Type: CAZyme
Location: 57 - 2141 (-)
Gene ID: MGYG000001666_4_2
Type: pfam
Location: 2182 - 3258 (-)
Type: pfam
Location: 2182 - 3258 (-)
Gene ID: MGYG000001666_4_3
Type: pfam
Location: 3290 - 5044 (-)
Type: pfam
Location: 3290 - 5044 (-)
Gene ID: MGYG000001666_4_4
Type: TC
Location: 5063 - 7885 (-)
Type: TC
Location: 5063 - 7885 (-)
Gene ID: MGYG000001666_4_5
Type: pfam
Location: 7912 - 9828 (-)
Type: pfam
Location: 7912 - 9828 (-)
Gene ID: MGYG000001666_4_6
Type: TC
Location: 9840 - 12974 (-)
Type: TC
Location: 9840 - 12974 (-)
Gene ID: MGYG000001666_4_7
Type: CAZyme
Location: 13182 - 14900 (-)
Type: CAZyme
Location: 13182 - 14900 (-)
Gene ID: MGYG000001666_4_8
Type: CAZyme
Location: 15355 - 16992 (-)
Type: CAZyme
Location: 15355 - 16992 (-)
Gene ID: MGYG000001666_4_9
Type: TF
Location: 17267 - 21247 (+)
Type: TF
Location: 17267 - 21247 (+)
Gene ID: MGYG000001666_4_10
Type: TF
Location: 21226 - 25290 (-)
Type: TF
Location: 21226 - 25290 (-)
Gene ID: MGYG000001666_4_11
Type: CAZyme
Location: 25559 - 27280 (+)
Type: CAZyme
Location: 25559 - 27280 (+)
Gene ID: MGYG000001666_4_12
Type: CAZyme
Location: 27287 - 28954 (+)
Type: CAZyme
Location: 27287 - 28954 (+)
Gene ID: MGYG000001666_4_13
Type: TC
Location: 28971 - 30401 (+)
Type: TC
Location: 28971 - 30401 (+)
Gene ID: MGYG000001666_4_14
Type: CAZyme
Location: 30414 - 31541 (+)
Type: CAZyme
Location: 30414 - 31541 (+)
Gene ID: MGYG000001666_4_15
Type: CAZyme
Location: 31538 - 32512 (+)
Type: CAZyme
Location: 31538 - 32512 (+)
Gene ID: MGYG000001666_4_16
Type: CAZyme
Location: 32505 - 34358 (+)
Type: CAZyme
Location: 32505 - 34358 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp902471685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.