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Cluster: MGYG000001661_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001661_26 MGYG000001661_26_17 16539 17519 - GH23
pfam MGYG000001661_26 MGYG000001661_26_18 17660 18385 - adh_short | KR | adh_short_C2
pfam MGYG000001661_26 MGYG000001661_26_19 18395 18805 - UPF0047
TC MGYG000001661_26 MGYG000001661_26_20 18839 20713 - 2.A.21.9.2
pfam MGYG000001661_26 MGYG000001661_26_21 21060 21524 + MaoC_dehydratas
NULL(UNKNOWN) MGYG000001661_26 MGYG000001661_26_22 21922 22101 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001661_26 MGYG000001661_26_23 22252 25455 + 1.B.14.6.1
pfam MGYG000001661_26 MGYG000001661_26_24 25471 27555 + SusD_RagB | SusD-like_3
CAZyme MGYG000001661_26 MGYG000001661_26_25 27656 29089 + PL1_2
Gene ID: MGYG000001661_26_17
Type: CAZyme
Location: 16539 - 17519 (-)
Gene ID: MGYG000001661_26_18
Type: pfam
Location: 17660 - 18385 (-)
Gene ID: MGYG000001661_26_19
Type: pfam
Location: 18395 - 18805 (-)
Gene ID: MGYG000001661_26_20
Type: TC
Location: 18839 - 20713 (-)
Gene ID: MGYG000001661_26_21
Type: pfam
Location: 21060 - 21524 (+)
Gene ID: MGYG000001661_26_22
Type:
Location: 21922 - 22101 (-)
Gene ID: MGYG000001661_26_23
Type: TC
Location: 22252 - 25455 (+)
Gene ID: MGYG000001661_26_24
Type: pfam
Location: 25471 - 27555 (+)
Gene ID: MGYG000001661_26_25
Type: CAZyme
Location: 27656 - 29089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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