Cluster: MGYG000001661_CGC35
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001661
- CGC Family ID: CGCFAM_00297
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001661_11 | MGYG000001661_11_86 | 95262 | 96956 | - | 2.A.21.3.19 |
| sulfatase | MGYG000001661_11 | MGYG000001661_11_87 | 96995 | 98134 | - | S1_22 |
| CAZyme | MGYG000001661_11 | MGYG000001661_11_88 | 98421 | 100328 | - | GH43_4 |
| NULL(UNKNOWN) | MGYG000001661_11 | MGYG000001661_11_89 | 100404 | 102173 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001661_11 | MGYG000001661_11_90 | 102266 | 104017 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001661_11 | MGYG000001661_11_91 | 104057 | 107251 | - | 1.B.14.6.1 |
| TF | MGYG000001661_11 | MGYG000001661_11_92 | 107690 | 111958 | - | HTH_AraC |
| CAZyme | MGYG000001661_11 | MGYG000001661_11_93 | 112137 | 113624 | + | GH43_4 |
| CAZyme | MGYG000001661_11 | MGYG000001661_11_94 | 113650 | 115641 | + | GH51_2 |
| CAZyme | MGYG000001661_11 | MGYG000001661_11_95 | 115648 | 116628 | + | GH43_29 |
| pfam | MGYG000001661_11 | MGYG000001661_11_96 | 116895 | 118952 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001661_11 | MGYG000001661_11_97 | 118965 | 122204 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000001661_11 | MGYG000001661_11_98 | 122376 | 122954 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001661_11 | MGYG000001661_11_99 | 122980 | 124134 | - | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| TC | MGYG000001661_11 | MGYG000001661_11_100 | 124184 | 125494 | - | 2.A.1.7.2 |
Gene ID: MGYG000001661_11_86
Type: TC
Location: 95262 - 96956 (-)
Type: TC
Location: 95262 - 96956 (-)
Gene ID: MGYG000001661_11_87
Type: sulfatase
Location: 96995 - 98134 (-)
Type: sulfatase
Location: 96995 - 98134 (-)
Gene ID: MGYG000001661_11_88
Type: CAZyme
Location: 98421 - 100328 (-)
Type: CAZyme
Location: 98421 - 100328 (-)
Gene ID: MGYG000001661_11_89
Type:
Location: 100404 - 102173 (-)
Type:
Location: 100404 - 102173 (-)
Gene ID: MGYG000001661_11_90
Type: pfam
Location: 102266 - 104017 (-)
Type: pfam
Location: 102266 - 104017 (-)
Gene ID: MGYG000001661_11_91
Type: TC
Location: 104057 - 107251 (-)
Type: TC
Location: 104057 - 107251 (-)
Gene ID: MGYG000001661_11_92
Type: TF
Location: 107690 - 111958 (-)
Type: TF
Location: 107690 - 111958 (-)
Gene ID: MGYG000001661_11_93
Type: CAZyme
Location: 112137 - 113624 (+)
Type: CAZyme
Location: 112137 - 113624 (+)
Gene ID: MGYG000001661_11_94
Type: CAZyme
Location: 113650 - 115641 (+)
Type: CAZyme
Location: 113650 - 115641 (+)
Gene ID: MGYG000001661_11_95
Type: CAZyme
Location: 115648 - 116628 (+)
Type: CAZyme
Location: 115648 - 116628 (+)
Gene ID: MGYG000001661_11_96
Type: pfam
Location: 116895 - 118952 (-)
Type: pfam
Location: 116895 - 118952 (-)
Gene ID: MGYG000001661_11_97
Type: TC
Location: 118965 - 122204 (-)
Type: TC
Location: 118965 - 122204 (-)
Gene ID: MGYG000001661_11_98
Type:
Location: 122376 - 122954 (-)
Type:
Location: 122376 - 122954 (-)
Gene ID: MGYG000001661_11_99
Type: pfam
Location: 122980 - 124134 (-)
Type: pfam
Location: 122980 - 124134 (-)
Gene ID: MGYG000001661_11_100
Type: TC
Location: 124184 - 125494 (-)
Type: TC
Location: 124184 - 125494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.