Cluster: MGYG000001661_CGC2
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001661
- CGC Family ID: CGCFAM_01476
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001661_1 | MGYG000001661_1_26 | 34339 | 37362 | - | GH2 |
| pfam | MGYG000001661_1 | MGYG000001661_1_27 | 37359 | 38921 | - | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | MGYG000001661_1 | MGYG000001661_1_28 | 38952 | 39680 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001661_1 | MGYG000001661_1_29 | 39656 | 42040 | - | 1.B.14.6.1 |
| pfam | MGYG000001661_1 | MGYG000001661_1_30 | 42330 | 43241 | + | SASA |
| CAZyme | MGYG000001661_1 | MGYG000001661_1_31 | 43356 | 46232 | - | GH2 |
| NULL(UNKNOWN) | MGYG000001661_1 | MGYG000001661_1_32 | 46242 | 47018 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001661_1 | MGYG000001661_1_33 | 47046 | 48326 | - | CE12 |
| pfam | MGYG000001661_1 | MGYG000001661_1_34 | 48340 | 50040 | - | Mfa_like_1 |
| CAZyme | MGYG000001661_1 | MGYG000001661_1_35 | 50192 | 52207 | + | PL11_1 |
| CAZyme | MGYG000001661_1 | MGYG000001661_1_36 | 52422 | 53993 | + | PL9_1 |
| NULL(UNKNOWN) | MGYG000001661_1 | MGYG000001661_1_37 | 54023 | 54445 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000001661_1 | MGYG000001661_1_38 | 54431 | 58804 | - | HTH_AraC |
| CAZyme | MGYG000001661_1 | MGYG000001661_1_39 | 58863 | 59822 | - | CE4 |
Gene ID: MGYG000001661_1_26
Type: CAZyme
Location: 34339 - 37362 (-)
Type: CAZyme
Location: 34339 - 37362 (-)
Gene ID: MGYG000001661_1_27
Type: pfam
Location: 37359 - 38921 (-)
Type: pfam
Location: 37359 - 38921 (-)
Gene ID: MGYG000001661_1_28
Type:
Location: 38952 - 39680 (-)
Type:
Location: 38952 - 39680 (-)
Gene ID: MGYG000001661_1_29
Type: TC
Location: 39656 - 42040 (-)
Type: TC
Location: 39656 - 42040 (-)
Gene ID: MGYG000001661_1_30
Type: pfam
Location: 42330 - 43241 (+)
Type: pfam
Location: 42330 - 43241 (+)
Gene ID: MGYG000001661_1_31
Type: CAZyme
Location: 43356 - 46232 (-)
Type: CAZyme
Location: 43356 - 46232 (-)
Gene ID: MGYG000001661_1_32
Type:
Location: 46242 - 47018 (-)
Type:
Location: 46242 - 47018 (-)
Gene ID: MGYG000001661_1_33
Type: CAZyme
Location: 47046 - 48326 (-)
Type: CAZyme
Location: 47046 - 48326 (-)
Gene ID: MGYG000001661_1_34
Type: pfam
Location: 48340 - 50040 (-)
Type: pfam
Location: 48340 - 50040 (-)
Gene ID: MGYG000001661_1_35
Type: CAZyme
Location: 50192 - 52207 (+)
Type: CAZyme
Location: 50192 - 52207 (+)
Gene ID: MGYG000001661_1_36
Type: CAZyme
Location: 52422 - 53993 (+)
Type: CAZyme
Location: 52422 - 53993 (+)
Gene ID: MGYG000001661_1_37
Type:
Location: 54023 - 54445 (+)
Type:
Location: 54023 - 54445 (+)
Gene ID: MGYG000001661_1_38
Type: TF
Location: 54431 - 58804 (-)
Type: TF
Location: 54431 - 58804 (-)
Gene ID: MGYG000001661_1_39
Type: CAZyme
Location: 58863 - 59822 (-)
Type: CAZyme
Location: 58863 - 59822 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.