Cluster: MGYG000001661_CGC13
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001661
- CGC Family ID: CGCFAM_06299
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001661_2 | MGYG000001661_2_140 | 193616 | 194797 | - | GH88 |
| CAZyme | MGYG000001661_2 | MGYG000001661_2_141 | 194824 | 196623 | - | PL35 |
| TF | MGYG000001661_2 | MGYG000001661_2_142 | 196721 | 197155 | - | LacI | LacI |
| TF | MGYG000001661_2 | MGYG000001661_2_143 | 197329 | 201267 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001661_2 | MGYG000001661_2_144 | 201277 | 202713 | - | CE20 |
| CAZyme | MGYG000001661_2 | MGYG000001661_2_145 | 202927 | 204924 | + | GH97 |
| CAZyme | MGYG000001661_2 | MGYG000001661_2_146 | 204950 | 206749 | + | GH2 |
| CAZyme | MGYG000001661_2 | MGYG000001661_2_147 | 206852 | 209050 | + | GH3 |
| NULL(UNKNOWN) | MGYG000001661_2 | MGYG000001661_2_148 | 209110 | 211413 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001661_2 | MGYG000001661_2_149 | 211717 | 214929 | + | 1.B.14.6.1 |
| TC | MGYG000001661_2 | MGYG000001661_2_150 | 214959 | 216872 | + | 8.A.46.1.6 |
Gene ID: MGYG000001661_2_140
Type: CAZyme
Location: 193616 - 194797 (-)
Type: CAZyme
Location: 193616 - 194797 (-)
Gene ID: MGYG000001661_2_141
Type: CAZyme
Location: 194824 - 196623 (-)
Type: CAZyme
Location: 194824 - 196623 (-)
Gene ID: MGYG000001661_2_142
Type: TF
Location: 196721 - 197155 (-)
Type: TF
Location: 196721 - 197155 (-)
Gene ID: MGYG000001661_2_143
Type: TF
Location: 197329 - 201267 (+)
Type: TF
Location: 197329 - 201267 (+)
Gene ID: MGYG000001661_2_144
Type: CAZyme
Location: 201277 - 202713 (-)
Type: CAZyme
Location: 201277 - 202713 (-)
Gene ID: MGYG000001661_2_145
Type: CAZyme
Location: 202927 - 204924 (+)
Type: CAZyme
Location: 202927 - 204924 (+)
Gene ID: MGYG000001661_2_146
Type: CAZyme
Location: 204950 - 206749 (+)
Type: CAZyme
Location: 204950 - 206749 (+)
Gene ID: MGYG000001661_2_147
Type: CAZyme
Location: 206852 - 209050 (+)
Type: CAZyme
Location: 206852 - 209050 (+)
Gene ID: MGYG000001661_2_148
Type:
Location: 209110 - 211413 (+)
Type:
Location: 209110 - 211413 (+)
Gene ID: MGYG000001661_2_149
Type: TC
Location: 211717 - 214929 (+)
Type: TC
Location: 211717 - 214929 (+)
Gene ID: MGYG000001661_2_150
Type: TC
Location: 214959 - 216872 (+)
Type: TC
Location: 214959 - 216872 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.