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Cluster: MGYG000001643_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001643_62 MGYG000001643_62_4 5720 6790 - GT9
pfam MGYG000001643_62 MGYG000001643_62_5 6774 7484 - DUF4254
pfam MGYG000001643_62 MGYG000001643_62_6 7647 7901 - Ribosomal_S20p
CAZyme MGYG000001643_62 MGYG000001643_62_7 8299 9327 - GH43_24
CAZyme MGYG000001643_62 MGYG000001643_62_8 9331 10995 - GH16_3
NULL(UNKNOWN) MGYG000001643_62 MGYG000001643_62_9 11077 11925 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000001643_62 MGYG000001643_62_10 12004 14061 - SusD_RagB | SusD-like_3
TC MGYG000001643_62 MGYG000001643_62_11 14077 17355 - 1.B.14.6.1
Gene ID: MGYG000001643_62_4
Type: CAZyme
Location: 5720 - 6790 (-)
Gene ID: MGYG000001643_62_5
Type: pfam
Location: 6774 - 7484 (-)
Gene ID: MGYG000001643_62_6
Type: pfam
Location: 7647 - 7901 (-)
Gene ID: MGYG000001643_62_7
Type: CAZyme
Location: 8299 - 9327 (-)
Gene ID: MGYG000001643_62_8
Type: CAZyme
Location: 9331 - 10995 (-)
Gene ID: MGYG000001643_62_9
Type:
Location: 11077 - 11925 (-)
Gene ID: MGYG000001643_62_10
Type: pfam
Location: 12004 - 14061 (-)
Gene ID: MGYG000001643_62_11
Type: TC
Location: 14077 - 17355 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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