Cluster: MGYG000001643_CGC41
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 10
- Substrate: xylan
- Genome ID: MGYG000001643
- CGC Family ID: CGCFAM_00273
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001643_59 | MGYG000001643_59_1 | 85 | 1908 | - | GH115 |
| NULL(UNKNOWN) | MGYG000001643_59 | MGYG000001643_59_2 | 1874 | 2680 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000001643_59 | MGYG000001643_59_3 | 2889 | 6926 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_4 | 6961 | 8586 | + | CE20 | CE20 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_5 | 8888 | 10603 | + | CBM91 | GH43_12 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_6 | 10643 | 11788 | + | CE1 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_7 | 11796 | 13172 | + | CBM6 | GH43_29 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_8 | 13277 | 14596 | + | CE6 |
| TC | MGYG000001643_59 | MGYG000001643_59_9 | 14612 | 16024 | + | 2.A.2.3.2 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_10 | 16046 | 17158 | + | GH10 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_11 | 17193 | 18182 | + | GH43_1 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_12 | 18201 | 19958 | + | GH97 |
| CAZyme | MGYG000001643_59 | MGYG000001643_59_13 | 19960 | 22401 | + | GH95 |
Gene ID: MGYG000001643_59_1
Type: CAZyme
Location: 85 - 1908 (-)
Type: CAZyme
Location: 85 - 1908 (-)
Gene ID: MGYG000001643_59_2
Type:
Location: 1874 - 2680 (-)
Type:
Location: 1874 - 2680 (-)
Gene ID: MGYG000001643_59_3
Type: TF
Location: 2889 - 6926 (+)
Type: TF
Location: 2889 - 6926 (+)
Gene ID: MGYG000001643_59_4
Type: CAZyme
Location: 6961 - 8586 (+)
Type: CAZyme
Location: 6961 - 8586 (+)
Gene ID: MGYG000001643_59_5
Type: CAZyme
Location: 8888 - 10603 (+)
Type: CAZyme
Location: 8888 - 10603 (+)
Gene ID: MGYG000001643_59_6
Type: CAZyme
Location: 10643 - 11788 (+)
Type: CAZyme
Location: 10643 - 11788 (+)
Gene ID: MGYG000001643_59_7
Type: CAZyme
Location: 11796 - 13172 (+)
Type: CAZyme
Location: 11796 - 13172 (+)
Gene ID: MGYG000001643_59_8
Type: CAZyme
Location: 13277 - 14596 (+)
Type: CAZyme
Location: 13277 - 14596 (+)
Gene ID: MGYG000001643_59_9
Type: TC
Location: 14612 - 16024 (+)
Type: TC
Location: 14612 - 16024 (+)
Gene ID: MGYG000001643_59_10
Type: CAZyme
Location: 16046 - 17158 (+)
Type: CAZyme
Location: 16046 - 17158 (+)
Gene ID: MGYG000001643_59_11
Type: CAZyme
Location: 17193 - 18182 (+)
Type: CAZyme
Location: 17193 - 18182 (+)
Gene ID: MGYG000001643_59_12
Type: CAZyme
Location: 18201 - 19958 (+)
Type: CAZyme
Location: 18201 - 19958 (+)
Gene ID: MGYG000001643_59_13
Type: CAZyme
Location: 19960 - 22401 (+)
Type: CAZyme
Location: 19960 - 22401 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp902471455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.