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Cluster: MGYG000001643_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001643_58 MGYG000001643_58_7 8003 10291 - GH3
TF MGYG000001643_58 MGYG000001643_58_8 10407 11306 - HTH_AraC | HTH_AraC
TC MGYG000001643_58 MGYG000001643_58_9 11437 13014 + 2.A.21.3.19
CAZyme MGYG000001643_58 MGYG000001643_58_10 13032 14099 + GH130_5
TC MGYG000001643_58 MGYG000001643_58_11 14258 17368 + 1.B.14.6.1
TC MGYG000001643_58 MGYG000001643_58_12 17383 18891 + 8.A.46.1.4
NULL(UNKNOWN) MGYG000001643_58 MGYG000001643_58_13 18903 19862 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000001643_58 MGYG000001643_58_14 19869 21332 + GH173
CAZyme MGYG000001643_58 MGYG000001643_58_15 21337 22815 + GH173
CAZyme MGYG000001643_58 MGYG000001643_58_16 22823 24010 + GH26
Gene ID: MGYG000001643_58_7
Type: CAZyme
Location: 8003 - 10291 (-)
Gene ID: MGYG000001643_58_8
Type: TF
Location: 10407 - 11306 (-)
Gene ID: MGYG000001643_58_9
Type: TC
Location: 11437 - 13014 (+)
Gene ID: MGYG000001643_58_10
Type: CAZyme
Location: 13032 - 14099 (+)
Gene ID: MGYG000001643_58_11
Type: TC
Location: 14258 - 17368 (+)
Gene ID: MGYG000001643_58_12
Type: TC
Location: 17383 - 18891 (+)
Gene ID: MGYG000001643_58_13
Type:
Location: 18903 - 19862 (+)
Gene ID: MGYG000001643_58_14
Type: CAZyme
Location: 19869 - 21332 (+)
Gene ID: MGYG000001643_58_15
Type: CAZyme
Location: 21337 - 22815 (+)
Gene ID: MGYG000001643_58_16
Type: CAZyme
Location: 22823 - 24010 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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