Cluster: MGYG000001643_CGC27
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate: beta-glucan
- Genome ID: MGYG000001643
- CGC Family ID: CGCFAM_00101
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001643_30 | MGYG000001643_30_1 | 41 | 1516 | - | 2.A.1.1.3 |
| CAZyme | MGYG000001643_30 | MGYG000001643_30_2 | 1716 | 3467 | - | GH5_4 |
| NULL(UNKNOWN) | MGYG000001643_30 | MGYG000001643_30_3 | 3581 | 5425 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001643_30 | MGYG000001643_30_4 | 5480 | 7168 | - | 8.A.46.1.2 |
| TC | MGYG000001643_30 | MGYG000001643_30_5 | 7206 | 10373 | - | 1.B.14.6.1 |
| TF | MGYG000001643_30 | MGYG000001643_30_6 | 10732 | 14799 | + | HTH_AraC |
| CAZyme | MGYG000001643_30 | MGYG000001643_30_7 | 14915 | 17794 | + | GH31_4 |
| CAZyme | MGYG000001643_30 | MGYG000001643_30_8 | 17820 | 20333 | + | GH2 |
| CAZyme | MGYG000001643_30 | MGYG000001643_30_9 | 20357 | 22594 | + | GH3 |
| pfam | MGYG000001643_30 | MGYG000001643_30_10 | 22793 | 24145 | - | AAA_14 | DUF4143 |
| NULL(UNKNOWN) | MGYG000001643_30 | MGYG000001643_30_11 | 24481 | 26310 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001643_30 | MGYG000001643_30_12 | 26384 | 28345 | - | CBM62 |
Gene ID: MGYG000001643_30_1
Type: TC
Location: 41 - 1516 (-)
Type: TC
Location: 41 - 1516 (-)
Gene ID: MGYG000001643_30_2
Type: CAZyme
Location: 1716 - 3467 (-)
Type: CAZyme
Location: 1716 - 3467 (-)
Gene ID: MGYG000001643_30_3
Type:
Location: 3581 - 5425 (-)
Type:
Location: 3581 - 5425 (-)
Gene ID: MGYG000001643_30_4
Type: TC
Location: 5480 - 7168 (-)
Type: TC
Location: 5480 - 7168 (-)
Gene ID: MGYG000001643_30_5
Type: TC
Location: 7206 - 10373 (-)
Type: TC
Location: 7206 - 10373 (-)
Gene ID: MGYG000001643_30_6
Type: TF
Location: 10732 - 14799 (+)
Type: TF
Location: 10732 - 14799 (+)
Gene ID: MGYG000001643_30_7
Type: CAZyme
Location: 14915 - 17794 (+)
Type: CAZyme
Location: 14915 - 17794 (+)
Gene ID: MGYG000001643_30_8
Type: CAZyme
Location: 17820 - 20333 (+)
Type: CAZyme
Location: 17820 - 20333 (+)
Gene ID: MGYG000001643_30_9
Type: CAZyme
Location: 20357 - 22594 (+)
Type: CAZyme
Location: 20357 - 22594 (+)
Gene ID: MGYG000001643_30_10
Type: pfam
Location: 22793 - 24145 (-)
Type: pfam
Location: 22793 - 24145 (-)
Gene ID: MGYG000001643_30_11
Type:
Location: 24481 - 26310 (-)
Type:
Location: 24481 - 26310 (-)
Gene ID: MGYG000001643_30_12
Type: CAZyme
Location: 26384 - 28345 (-)
Type: CAZyme
Location: 26384 - 28345 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp902471455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.