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Cluster: MGYG000001643_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001643_18 MGYG000001643_18_15 15423 17429 - GH97
peptidase MGYG000001643_18 MGYG000001643_18_16 17573 18718 + S09.UPW
pfam MGYG000001643_18 MGYG000001643_18_17 19438 19896 + RseC_MucC
TC MGYG000001643_18 MGYG000001643_18_18 19935 20768 + 3.D.6.1.3
TC MGYG000001643_18 MGYG000001643_18_19 20765 22081 + 3.D.6.1.2
TC MGYG000001643_18 MGYG000001643_18_20 22078 23058 + 3.D.6.1.2
pfam MGYG000001643_18 MGYG000001643_18_21 23055 23651 + FMN_bind
TC MGYG000001643_18 MGYG000001643_18_22 23648 24238 + 3.D.6.1.2
TC MGYG000001643_18 MGYG000001643_18_23 24244 24822 + 3.D.6.1.2
TC MGYG000001643_18 MGYG000001643_18_24 25387 28218 + 1.C.105.2.12
Gene ID: MGYG000001643_18_15
Type: CAZyme
Location: 15423 - 17429 (-)
Gene ID: MGYG000001643_18_16
Type: peptidase
Location: 17573 - 18718 (+)
Gene ID: MGYG000001643_18_17
Type: pfam
Location: 19438 - 19896 (+)
Gene ID: MGYG000001643_18_18
Type: TC
Location: 19935 - 20768 (+)
Gene ID: MGYG000001643_18_19
Type: TC
Location: 20765 - 22081 (+)
Gene ID: MGYG000001643_18_20
Type: TC
Location: 22078 - 23058 (+)
Gene ID: MGYG000001643_18_21
Type: pfam
Location: 23055 - 23651 (+)
Gene ID: MGYG000001643_18_22
Type: TC
Location: 23648 - 24238 (+)
Gene ID: MGYG000001643_18_23
Type: TC
Location: 24244 - 24822 (+)
Gene ID: MGYG000001643_18_24
Type: TC
Location: 25387 - 28218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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