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Cluster: MGYG000001643_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001643_1 MGYG000001643_1_47 52588 53823 + GH25
NULL(UNKNOWN) MGYG000001643_1 MGYG000001643_1_48 53990 54130 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000001643_1 MGYG000001643_1_49 54171 56444 - GH3
pfam MGYG000001643_1 MGYG000001643_1_50 56631 58652 - DUF5016 | DUF5125 | DUF5121 | DUF5121
CAZyme MGYG000001643_1 MGYG000001643_1_51 58677 60173 - GH30_3
pfam MGYG000001643_1 MGYG000001643_1_52 60227 61756 - SusD_RagB | SusD-like_3
TC MGYG000001643_1 MGYG000001643_1_53 61772 64741 - 1.B.14.6.1
Gene ID: MGYG000001643_1_47
Type: CAZyme
Location: 52588 - 53823 (+)
Gene ID: MGYG000001643_1_48
Type:
Location: 53990 - 54130 (-)
Gene ID: MGYG000001643_1_49
Type: CAZyme
Location: 54171 - 56444 (-)
Gene ID: MGYG000001643_1_50
Type: pfam
Location: 56631 - 58652 (-)
Gene ID: MGYG000001643_1_51
Type: CAZyme
Location: 58677 - 60173 (-)
Gene ID: MGYG000001643_1_52
Type: pfam
Location: 60227 - 61756 (-)
Gene ID: MGYG000001643_1_53
Type: TC
Location: 61772 - 64741 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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