Cluster: MGYG000001643_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001643
- CGC Family ID: CGCFAM_00998
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001643_14 | MGYG000001643_14_3 | 2742 | 5003 | - | GH3 |
| CAZyme | MGYG000001643_14 | MGYG000001643_14_4 | 5152 | 8271 | - | GH3 | GH43_34 |
| pfam | MGYG000001643_14 | MGYG000001643_14_5 | 8389 | 9330 | - | SusF_SusE | SusF_SusE |
| CAZyme | MGYG000001643_14 | MGYG000001643_14_6 | 9372 | 10802 | - | GH27 |
| pfam | MGYG000001643_14 | MGYG000001643_14_7 | 10825 | 12390 | - | SusF_SusE | SusF_SusE |
| TC | MGYG000001643_14 | MGYG000001643_14_8 | 12435 | 14174 | - | 8.A.46.1.1 |
| TC | MGYG000001643_14 | MGYG000001643_14_9 | 14192 | 17488 | - | 1.B.14.6.1 |
| STP | MGYG000001643_14 | MGYG000001643_14_10 | 17687 | 18274 | + | Sigma70_r2 | Sigma70_r4_2 |
| STP | MGYG000001643_14 | MGYG000001643_14_11 | 18284 | 19303 | + | FecR |
| CAZyme | MGYG000001643_14 | MGYG000001643_14_12 | 19340 | 21436 | + | GH97 |
| NULL(UNKNOWN) | MGYG000001643_14 | MGYG000001643_14_13 | 21718 | 23037 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001643_14 | MGYG000001643_14_14 | 23048 | 25030 | - | 1.B.14.12.3 |
Gene ID: MGYG000001643_14_3
Type: CAZyme
Location: 2742 - 5003 (-)
Type: CAZyme
Location: 2742 - 5003 (-)
Gene ID: MGYG000001643_14_4
Type: CAZyme
Location: 5152 - 8271 (-)
Type: CAZyme
Location: 5152 - 8271 (-)
Gene ID: MGYG000001643_14_5
Type: pfam
Location: 8389 - 9330 (-)
Type: pfam
Location: 8389 - 9330 (-)
Gene ID: MGYG000001643_14_6
Type: CAZyme
Location: 9372 - 10802 (-)
Type: CAZyme
Location: 9372 - 10802 (-)
Gene ID: MGYG000001643_14_7
Type: pfam
Location: 10825 - 12390 (-)
Type: pfam
Location: 10825 - 12390 (-)
Gene ID: MGYG000001643_14_8
Type: TC
Location: 12435 - 14174 (-)
Type: TC
Location: 12435 - 14174 (-)
Gene ID: MGYG000001643_14_9
Type: TC
Location: 14192 - 17488 (-)
Type: TC
Location: 14192 - 17488 (-)
Gene ID: MGYG000001643_14_10
Type: STP
Location: 17687 - 18274 (+)
Type: STP
Location: 17687 - 18274 (+)
Gene ID: MGYG000001643_14_11
Type: STP
Location: 18284 - 19303 (+)
Type: STP
Location: 18284 - 19303 (+)
Gene ID: MGYG000001643_14_12
Type: CAZyme
Location: 19340 - 21436 (+)
Type: CAZyme
Location: 19340 - 21436 (+)
Gene ID: MGYG000001643_14_13
Type:
Location: 21718 - 23037 (-)
Type:
Location: 21718 - 23037 (-)
Gene ID: MGYG000001643_14_14
Type: TC
Location: 23048 - 25030 (-)
Type: TC
Location: 23048 - 25030 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp902471455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.