Cluster: MGYG000001643_CGC11
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001643
- CGC Family ID: CGCFAM_00544
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001643_8 | MGYG000001643_8_27 | 31668 | 32978 | + | 2.A.66.1.4 |
| pfam | MGYG000001643_8 | MGYG000001643_8_28 | 33089 | 33979 | + | GHMP_kinases_N | GHMP_kinases_C |
| pfam | MGYG000001643_8 | MGYG000001643_8_29 | 34129 | 34743 | + | GrpE |
| TC | MGYG000001643_8 | MGYG000001643_8_30 | 34782 | 35990 | + | 3.A.5.8.1 |
| sulfatase | MGYG000001643_8 | MGYG000001643_8_31 | 36054 | 37175 | - | S1_22 |
| CAZyme | MGYG000001643_8 | MGYG000001643_8_32 | 37182 | 39110 | - | CE20 | CE20 |
| CAZyme | MGYG000001643_8 | MGYG000001643_8_33 | 39379 | 41721 | + | GH95 |
| CAZyme | MGYG000001643_8 | MGYG000001643_8_34 | 41718 | 44288 | + | GH2 |
| TC | MGYG000001643_8 | MGYG000001643_8_35 | 44419 | 47532 | + | 1.B.14.6.1 |
| pfam | MGYG000001643_8 | MGYG000001643_8_36 | 47551 | 49140 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000001643_8 | MGYG000001643_8_37 | 49356 | 51089 | + | FG-GAP | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| CAZyme | MGYG000001643_8 | MGYG000001643_8_38 | 51290 | 53686 | + | GH36 |
| CAZyme | MGYG000001643_8 | MGYG000001643_8_39 | 53719 | 55893 | + | GH92 |
| TF | MGYG000001643_8 | MGYG000001643_8_40 | 55922 | 59932 | + | HTH_AraC |
| CAZyme | MGYG000001643_8 | MGYG000001643_8_41 | 60099 | 62240 | + | GH36 |
Gene ID: MGYG000001643_8_27
Type: TC
Location: 31668 - 32978 (+)
Type: TC
Location: 31668 - 32978 (+)
Gene ID: MGYG000001643_8_28
Type: pfam
Location: 33089 - 33979 (+)
Type: pfam
Location: 33089 - 33979 (+)
Gene ID: MGYG000001643_8_29
Type: pfam
Location: 34129 - 34743 (+)
Type: pfam
Location: 34129 - 34743 (+)
Gene ID: MGYG000001643_8_30
Type: TC
Location: 34782 - 35990 (+)
Type: TC
Location: 34782 - 35990 (+)
Gene ID: MGYG000001643_8_31
Type: sulfatase
Location: 36054 - 37175 (-)
Type: sulfatase
Location: 36054 - 37175 (-)
Gene ID: MGYG000001643_8_32
Type: CAZyme
Location: 37182 - 39110 (-)
Type: CAZyme
Location: 37182 - 39110 (-)
Gene ID: MGYG000001643_8_33
Type: CAZyme
Location: 39379 - 41721 (+)
Type: CAZyme
Location: 39379 - 41721 (+)
Gene ID: MGYG000001643_8_34
Type: CAZyme
Location: 41718 - 44288 (+)
Type: CAZyme
Location: 41718 - 44288 (+)
Gene ID: MGYG000001643_8_35
Type: TC
Location: 44419 - 47532 (+)
Type: TC
Location: 44419 - 47532 (+)
Gene ID: MGYG000001643_8_36
Type: pfam
Location: 47551 - 49140 (+)
Type: pfam
Location: 47551 - 49140 (+)
Gene ID: MGYG000001643_8_37
Type: pfam
Location: 49356 - 51089 (+)
Type: pfam
Location: 49356 - 51089 (+)
Gene ID: MGYG000001643_8_38
Type: CAZyme
Location: 51290 - 53686 (+)
Type: CAZyme
Location: 51290 - 53686 (+)
Gene ID: MGYG000001643_8_39
Type: CAZyme
Location: 53719 - 55893 (+)
Type: CAZyme
Location: 53719 - 55893 (+)
Gene ID: MGYG000001643_8_40
Type: TF
Location: 55922 - 59932 (+)
Type: TF
Location: 55922 - 59932 (+)
Gene ID: MGYG000001643_8_41
Type: CAZyme
Location: 60099 - 62240 (+)
Type: CAZyme
Location: 60099 - 62240 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp902471455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.