Cluster: MGYG000001635_CGC34
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001635
- CGC Family ID: CGCFAM_06074
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001635_27 | MGYG000001635_27_12 | 11850 | 13124 | - | GH140 |
| CAZyme | MGYG000001635_27 | MGYG000001635_27_13 | 13161 | 15407 | - | GH78 |
| TC | MGYG000001635_27 | MGYG000001635_27_14 | 15445 | 16767 | - | 4.A.3.2.2 |
| TF | MGYG000001635_27 | MGYG000001635_27_15 | 16947 | 17999 | + | HTH_AraC |
| NULL(UNKNOWN) | MGYG000001635_27 | MGYG000001635_27_16 | 18039 | 19286 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001635_27 | MGYG000001635_27_17 | 19362 | 20150 | + | 2.A.5.5.2 |
| pfam | MGYG000001635_27 | MGYG000001635_27_18 | 20535 | 21521 | + | ABC_sub_bind |
| TC | MGYG000001635_27 | MGYG000001635_27_19 | 21533 | 22465 | + | 3.A.1.34.1 |
| TC | MGYG000001635_27 | MGYG000001635_27_20 | 22458 | 23252 | + | 3.A.1.34.1 |
| pfam | MGYG000001635_27 | MGYG000001635_27_21 | 23266 | 23898 | - | DUF421 |
| pfam | MGYG000001635_27 | MGYG000001635_27_22 | 23939 | 24292 | + | DUF3792 |
| TC | MGYG000001635_27 | MGYG000001635_27_23 | 24308 | 24973 | - | 9.B.143.2.3 |
Gene ID: MGYG000001635_27_12
Type: CAZyme
Location: 11850 - 13124 (-)
Type: CAZyme
Location: 11850 - 13124 (-)
Gene ID: MGYG000001635_27_13
Type: CAZyme
Location: 13161 - 15407 (-)
Type: CAZyme
Location: 13161 - 15407 (-)
Gene ID: MGYG000001635_27_14
Type: TC
Location: 15445 - 16767 (-)
Type: TC
Location: 15445 - 16767 (-)
Gene ID: MGYG000001635_27_15
Type: TF
Location: 16947 - 17999 (+)
Type: TF
Location: 16947 - 17999 (+)
Gene ID: MGYG000001635_27_16
Type:
Location: 18039 - 19286 (+)
Type:
Location: 18039 - 19286 (+)
Gene ID: MGYG000001635_27_17
Type: TC
Location: 19362 - 20150 (+)
Type: TC
Location: 19362 - 20150 (+)
Gene ID: MGYG000001635_27_18
Type: pfam
Location: 20535 - 21521 (+)
Type: pfam
Location: 20535 - 21521 (+)
Gene ID: MGYG000001635_27_19
Type: TC
Location: 21533 - 22465 (+)
Type: TC
Location: 21533 - 22465 (+)
Gene ID: MGYG000001635_27_20
Type: TC
Location: 22458 - 23252 (+)
Type: TC
Location: 22458 - 23252 (+)
Gene ID: MGYG000001635_27_21
Type: pfam
Location: 23266 - 23898 (-)
Type: pfam
Location: 23266 - 23898 (-)
Gene ID: MGYG000001635_27_22
Type: pfam
Location: 23939 - 24292 (+)
Type: pfam
Location: 23939 - 24292 (+)
Gene ID: MGYG000001635_27_23
Type: TC
Location: 24308 - 24973 (-)
Type: TC
Location: 24308 - 24973 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Longibaculum
Species
Longibaculum sp900538465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.