Cluster: MGYG000001635_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: MGYG000001635
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001635_17 | MGYG000001635_17_25 | 20854 | 22173 | - | 4.A.3.2.6 |
| TC | MGYG000001635_17 | MGYG000001635_17_26 | 22192 | 22524 | - | 4.A.3.2.2 |
| TC | MGYG000001635_17 | MGYG000001635_17_27 | 22525 | 22845 | - | 4.A.3.2.1 |
| peptidase | MGYG000001635_17 | MGYG000001635_17_28 | 22842 | 23894 | - | M42.UPW |
| TF | MGYG000001635_17 | MGYG000001635_17_29 | 23887 | 25791 | - | HTH_11 |
| CAZyme | MGYG000001635_17 | MGYG000001635_17_30 | 26477 | 27898 | - | GH1 |
Gene ID: MGYG000001635_17_25
Type: TC
Location: 20854 - 22173 (-)
Type: TC
Location: 20854 - 22173 (-)
Gene ID: MGYG000001635_17_26
Type: TC
Location: 22192 - 22524 (-)
Type: TC
Location: 22192 - 22524 (-)
Gene ID: MGYG000001635_17_27
Type: TC
Location: 22525 - 22845 (-)
Type: TC
Location: 22525 - 22845 (-)
Gene ID: MGYG000001635_17_28
Type: peptidase
Location: 22842 - 23894 (-)
Type: peptidase
Location: 22842 - 23894 (-)
Gene ID: MGYG000001635_17_29
Type: TF
Location: 23887 - 25791 (-)
Type: TF
Location: 23887 - 25791 (-)
Gene ID: MGYG000001635_17_30
Type: CAZyme
Location: 26477 - 27898 (-)
Type: CAZyme
Location: 26477 - 27898 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Longibaculum
Species
Longibaculum sp900538465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001635_17_25 | vegan > omnivore | 1.34879 | 0.01188 |
| MGYG000001635_17_26 | vegan > omnivore | 2.45381 | 0.01188 |
| MGYG000001635_17_27 | vegan > omnivore | 2.51698 | 0.01188 |
| MGYG000001635_17_27 | vegetarian > omnivore | 2.81529 | 0.02242 |