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Cluster: MGYG000001628_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001628_2 MGYG000001628_2_40 45207 45650 + 4.A.6.1.16
pfam MGYG000001628_2 MGYG000001628_2_41 45650 45931 + YajC
TC MGYG000001628_2 MGYG000001628_2_42 45968 46450 + 4.A.6.1.4
TC MGYG000001628_2 MGYG000001628_2_43 46541 47341 + 4.A.6.1.4
TC MGYG000001628_2 MGYG000001628_2_44 47331 48413 + 4.A.6.1.4
TF MGYG000001628_2 MGYG000001628_2_45 48599 49330 + GntR
STP MGYG000001628_2 MGYG000001628_2_46 49445 50611 + SIS | SIS
CAZyme MGYG000001628_2 MGYG000001628_2_47 50729 51898 + CE9
Gene ID: MGYG000001628_2_40
Type: TC
Location: 45207 - 45650 (+)
Gene ID: MGYG000001628_2_41
Type: pfam
Location: 45650 - 45931 (+)
Gene ID: MGYG000001628_2_42
Type: TC
Location: 45968 - 46450 (+)
Gene ID: MGYG000001628_2_43
Type: TC
Location: 46541 - 47341 (+)
Gene ID: MGYG000001628_2_44
Type: TC
Location: 47331 - 48413 (+)
Gene ID: MGYG000001628_2_45
Type: TF
Location: 48599 - 49330 (+)
Gene ID: MGYG000001628_2_46
Type: STP
Location: 49445 - 50611 (+)
Gene ID: MGYG000001628_2_47
Type: CAZyme
Location: 50729 - 51898 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001628_2_41 vegan > omnivore 1.16269 0.00566

🧭 Explore Read Mapping of CGC

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