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Cluster: MGYG000001624_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001624_4 MGYG000001624_4_6 6072 6713 - 5.A.3.3.2
TC MGYG000001624_4 MGYG000001624_4_7 6710 9151 - 5.A.3.3.2
TF MGYG000001624_4 MGYG000001624_4_8 9577 10362 + HTH_AraC | HTH_AraC
TC MGYG000001624_4 MGYG000001624_4_9 10432 11931 - 2.A.1.3.43
STP MGYG000001624_4 MGYG000001624_4_10 12019 12573 + TetR_N
TC MGYG000001624_4 MGYG000001624_4_11 12637 13392 - 3.A.1.14.7
pfam MGYG000001624_4 MGYG000001624_4_12 13394 14401 - FecCD
TC MGYG000001624_4 MGYG000001624_4_13 14388 15350 - 3.A.1.14.2
TC MGYG000001624_4 MGYG000001624_4_14 15360 16319 - 3.A.1.14.8
TC MGYG000001624_4 MGYG000001624_4_15 16773 17099 + 4.A.3.2.1
TC MGYG000001624_4 MGYG000001624_4_16 17201 18559 + 4.A.3.2.7
TC MGYG000001624_4 MGYG000001624_4_17 18621 18968 + 4.A.3.2.1
TF MGYG000001624_4 MGYG000001624_4_18 18970 19827 + HTH_AraC | HTH_AraC
CAZyme MGYG000001624_4 MGYG000001624_4_19 19988 21343 + GH4
pfam MGYG000001624_4 MGYG000001624_4_20 21380 22141 + YdjC
pfam MGYG000001624_4 MGYG000001624_4_21 22247 22759 - OMP_b-brl
TC MGYG000001624_4 MGYG000001624_4_22 22827 23378 - 1.B.6.2.20
Gene ID: MGYG000001624_4_6
Type: TC
Location: 6072 - 6713 (-)
Gene ID: MGYG000001624_4_7
Type: TC
Location: 6710 - 9151 (-)
Gene ID: MGYG000001624_4_8
Type: TF
Location: 9577 - 10362 (+)
Gene ID: MGYG000001624_4_9
Type: TC
Location: 10432 - 11931 (-)
Gene ID: MGYG000001624_4_10
Type: STP
Location: 12019 - 12573 (+)
Gene ID: MGYG000001624_4_11
Type: TC
Location: 12637 - 13392 (-)
Gene ID: MGYG000001624_4_12
Type: pfam
Location: 13394 - 14401 (-)
Gene ID: MGYG000001624_4_13
Type: TC
Location: 14388 - 15350 (-)
Gene ID: MGYG000001624_4_14
Type: TC
Location: 15360 - 16319 (-)
Gene ID: MGYG000001624_4_15
Type: TC
Location: 16773 - 17099 (+)
Gene ID: MGYG000001624_4_16
Type: TC
Location: 17201 - 18559 (+)
Gene ID: MGYG000001624_4_17
Type: TC
Location: 18621 - 18968 (+)
Gene ID: MGYG000001624_4_18
Type: TF
Location: 18970 - 19827 (+)
Gene ID: MGYG000001624_4_19
Type: CAZyme
Location: 19988 - 21343 (+)
Gene ID: MGYG000001624_4_20
Type: pfam
Location: 21380 - 22141 (+)
Gene ID: MGYG000001624_4_21
Type: pfam
Location: 22247 - 22759 (-)
Gene ID: MGYG000001624_4_22
Type: TC
Location: 22827 - 23378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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