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Cluster: MGYG000001622_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001622_1 MGYG000001622_1_286 284027 285883 - PL33_1
TF MGYG000001622_1 MGYG000001622_1_287 285897 287531 - HTH_AraC | HTH_AraC
TC MGYG000001622_1 MGYG000001622_1_288 287532 289385 - 8.A.59.2.1
STP MGYG000001622_1 MGYG000001622_1_289 289652 291016 + SBP_bac_1
TC MGYG000001622_1 MGYG000001622_1_290 291257 292306 + 3.A.1.1.34
TC MGYG000001622_1 MGYG000001622_1_291 292322 293158 + 3.A.1.1.11
CAZyme MGYG000001622_1 MGYG000001622_1_292 293175 294368 + GH88
CAZyme MGYG000001622_1 MGYG000001622_1_293 294381 296396 + PL12_1
Gene ID: MGYG000001622_1_286
Type: CAZyme
Location: 284027 - 285883 (-)
Gene ID: MGYG000001622_1_287
Type: TF
Location: 285897 - 287531 (-)
Gene ID: MGYG000001622_1_288
Type: TC
Location: 287532 - 289385 (-)
Gene ID: MGYG000001622_1_289
Type: STP
Location: 289652 - 291016 (+)
Gene ID: MGYG000001622_1_290
Type: TC
Location: 291257 - 292306 (+)
Gene ID: MGYG000001622_1_291
Type: TC
Location: 292322 - 293158 (+)
Gene ID: MGYG000001622_1_292
Type: CAZyme
Location: 293175 - 294368 (+)
Gene ID: MGYG000001622_1_293
Type: CAZyme
Location: 294381 - 296396 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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